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PLM4_32_b1_sep16_scaffold_309

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_309_1
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(1..864)
DNA (864bp) protein (288aa)
Radical SAM domain protein bin=GWB1_CP_36_13 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
radical SAM protein
Tax=RBG_13_OP8X_37_8_curated
PLM4_32_b1_sep16_scaffold_309_2
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(957..2054)
DNA (1098bp) protein (366aa)
Putative uncharacterized protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SLJ2_RHOMR bin=16ft_combo_ws3_JS1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM4_32_b1_sep16_scaffold_309_3
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(2117..3532)
DNA (1416bp) protein (472aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_309_4
unknown

Not on your lists

comp(3708..4340)
DNA (633bp) protein (211aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_309_5
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(4375..5976)
DNA (1602bp) protein (534aa)
Putative uncharacterized protein Tax=Sphingobacterium spiritivorum RepID=C2G393_9SPHI bin=16ft_combo_ws3_JS1 species=Sphingobacterium spiritivorum genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_309_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

6133..7182
DNA (1050bp) protein (350aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGV4_THET1 bin=16ft_combo_ws3_JS1 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
dppF; oligopeptide/dipeptide ABC transporter ATP-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_309_7
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

7188..8555
DNA (1368bp) protein (456aa)
Beta-glucosidase A Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FN28_STIAD bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Beta-glucosidase A
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_309_8
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

8575..11724
DNA (3150bp) protein (1050aa)
Glycosyl hydrolase Tax=Bacteroides finegoldii DSM 17565 RepID=C9L216_9BACE bin=16ft_combo_ws3_JS1 species=Bacteroides finegoldii genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_309_9
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11735..12691)
DNA (957bp) protein (319aa)
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component Tax=Plesiocystis pacifica SIR-1 RepID=A6FX44_9DELT
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component {ECO:0000313|EMBL:EDM81868.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
ABC transporter ATP-binding protein
PLM4_32_b1_sep16_scaffold_309_10
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(12684..13622)
DNA (939bp) protein (313aa)
Peptide ABC transporter, permease protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9F290_SORC5 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
peptide ABC transporter permease
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_309_11
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(13619..14602)
DNA (984bp) protein (328aa)
Putative oligopeptide/dipeptide ABC transporter permease Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MU59_CORCM bin=16ft_combo_ws3_JS1 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
dppB; putative oligopeptide/dipeptide ABC transporter permease
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_309_12
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(14604..16277)
DNA (1674bp) protein (558aa)
ABC-type dipeptide transport system, periplasmic component Tax=Sorangium cellulosum (strain So ce56) RepID=A9F296_SORC5 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
nikA; putative oligopeptide/dipeptide ABC transporter periplasmic oligopeptide/dipeptide-binding protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_309_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(16280..17098)
DNA (819bp) protein (273aa)
Glycosyl hydrolase, family 15 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CY51_MYXXD bin=16ft_combo_ws3_JS1 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
glucosyl hydrolase family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_309_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(17115..18512)
DNA (1398bp) protein (466aa)
Uncharacterized protein Tax=Riemerella anatipestifer RA-CH-1 RepID=J9QZ61_RIEAN bin=16ft_combo_ws3_JS1 species=Riemerella anatipestifer genus=Riemerella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_309_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

18588..22013
DNA (3426bp) protein (1142aa)
Putative uncharacterized protein Tax=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) RepID=Q47XT1_COLP3 bin=16ft_combo_ws3_JS1 species=Colwellia psychrerythraea genus=Colwellia taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_309_16
RBG_13_Planctomycetes_46_10_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(22059..24122)
DNA (2064bp) protein (688aa)
Polymorphic outer membrane protein bin=GWF2_Planctomycetes_42_9 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
polymorphic outer membrane protein
Tax=RBG_13_Planctomycetes_46_10_curated
PLM4_32_b1_sep16_scaffold_309_17
unknown

Not on your lists

comp(24556..24876)
DNA (321bp) protein (107aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_309_18
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25052..27355
DNA (2304bp) protein (768aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4YCD5_SORCE
Exported nucleotide-binding protein {ECO:0000313|EMBL:CAN91181.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_309_19
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(27933..28805)
DNA (873bp) protein (291aa)
GLUG domain protein Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QVC7_CHLT3
GLUG domain-containing protein
Tax=CG_Ignavi_02
PLM4_32_b1_sep16_scaffold_309_20
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28772..29737)
DNA (966bp) protein (322aa)
Uncharacterized protein Tax=Sorangium cellulosum (strain So ce56) RepID=A9GNP7_SORC5
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_32_b1_sep16_scaffold_309_21
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30621..30833
DNA (213bp) protein (71aa)
endothelin-converting enzyme 1 (EC:3.4.24.71)
Endothelin-converting enzyme 1 {ECO:0000313|EMBL:ADG12337.1}; EC=3.4.24.71 {ECO:0000313|EMBL:ADG12337.1};; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
Endothelin-converting enzyme 1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VPB4_CAUST
Displaying 21 items

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