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PLM4_32_b1_sep16_scaffold_470

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_470_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1..402
DNA (402bp) protein (134aa)
Predicted thioesterase {ECO:0000313|EMBL:CDM66960.1}; EC=3.1.2.23 {ECO:0000313|EMBL:CDM66960.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Thioesterase superfamily protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LH15_HALO1
thioesterase superfamily protein
PLM4_32_b1_sep16_scaffold_470_2
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

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419..1450
DNA (1032bp) protein (344aa)
Alcohol dehydrogenase zinc-binding domain protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HE28_ANADF
alcohol dehydrogenase
Tax=RBG_16_Planctomycetes_43_13_curated
PLM4_32_b1_sep16_scaffold_470_3
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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1657..3306
DNA (1650bp) protein (550aa)
crotonase (EC:4.2.1.17)
Crotonase Tax=Sorangium cellulosum So0157-2 RepID=S4XRA8_SORCE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_b1_sep16_scaffold_470_4
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

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3308..3964
DNA (657bp) protein (219aa)
benzoyl-CoA oxygenase Tax=Novosphingobium sp. B-7 RepID=UPI0003B4BA85
bdxB; benzoyl-CoA oxygenase component b
Tax=CG_Delta_07
PLM4_32_b1_sep16_scaffold_470_5
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4010..4726
DNA (717bp) protein (239aa)
Benzoyl-CoA oxygenase component B Tax=Plesiocystis pacifica SIR-1 RepID=A6G1F6_9DELT
Benzoyl-CoA oxygenase component B {ECO:0000313|EMBL:EDM80220.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
benzoyl-CoA oxygenase subunit beta
PLM4_32_b1_sep16_scaffold_470_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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4865..6313
DNA (1449bp) protein (483aa)
Aldehyde Dehydrogenase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MJ64_9BACT
aldehyde dehydrogenase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_b1_sep16_scaffold_470_7
unknown

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comp(6209..6466)
DNA (258bp) protein (86aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_470_8
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

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comp(6616..8955)
DNA (2340bp) protein (780aa)
Putative uncharacterized protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hydrolase
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
PLM4_32_b1_sep16_scaffold_470_9
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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9142..9828
DNA (687bp) protein (229aa)
Iron (Metal) dependent repressor, DtxR family Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NP76_ROSCS
DtxR family iron dependent repressor
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM4_32_b1_sep16_scaffold_470_10
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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9828..11198
DNA (1371bp) protein (457aa)
Divalent metal cation transporter MntH Tax=Pedosphaera parvula Ellin514 RepID=B9XBW0_9BACT
Mn2+/Fe2+ transporter
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM4_32_b1_sep16_scaffold_470_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11205..11633
DNA (429bp) protein (143aa)
Universal stress protein Tax=Pedosphaera parvula Ellin514 RepID=B9XBW1_9BACT
UspA domain protein {ECO:0000313|EMBL:EEF62429.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
UspA domain-containing protein
PLM4_32_b1_sep16_scaffold_470_12
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

11836..13197
DNA (1362bp) protein (454aa)
Glutamate dehydrogenase Tax=Melioribacter roseus (strain P3M) RepID=I7A5T0_MELRP
NADP-dependent glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
PLM4_32_b1_sep16_scaffold_470_13
bacterium UASB270, Bacteria

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13233..14567
DNA (1335bp) protein (445aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01981}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_01981};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01981};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_01981};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_01981}; species="Bacteria.;" source="bacterium UASB270.;"
6-phosphofructokinase (EC:2.7.1.90)
6-phosphofructokinase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJW5_CHLTF
PLM4_32_b1_sep16_scaffold_470_14
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

14684..15616
DNA (933bp) protein (311aa)
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI0003695237
Tax=RBG_16_Caldithrix_48_16_curated
PLM4_32_b1_sep16_scaffold_470_15
unknown

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15634..16245
DNA (612bp) protein (204aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_470_16
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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16279..17733
DNA (1455bp) protein (485aa)
Peptidase M20C, Xaa-His dipeptidase Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TAH3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDA54464.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
peptidase M20C, Xaa-His dipeptidase
PLM4_32_b1_sep16_scaffold_470_17
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(18355..21012)
DNA (2658bp) protein (886aa)
FG-GAP repeat protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XWF1_9BACT bin=16ft_combo_ws3_JS1 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 17 items

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