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PLM4_32_b1_sep16_scaffold_1525

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1525_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2..1114
DNA (1113bp) protein (371aa)
Multi-sensor signal transduction histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transcriptional regulator, CdaR family
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1525_2
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

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1075..1485
DNA (411bp) protein (137aa)
Multi-sensor signal transduction histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor signal transduction histidine kinase
Tax=RBG_13_Chloroflexi_60_13_curated
PLM4_32_b1_sep16_scaffold_1525_3
RLO_PLX_64_10, Bacteria

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1534..2175
DNA (642bp) protein (214aa)
Two component transcriptional regulator, LuxR family bin=GWC2_Methylomirabilis_70_16 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_32_b1_sep16_scaffold_1525_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2283..2669
DNA (387bp) protein (129aa)
Response regulator receiver bin=GWC2_Methylomirabilis_70_16 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
integral membrane sensor hybrid histidine kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1525_5
unknown

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comp(2659..2910)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1525_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2925..3692)
DNA (768bp) protein (256aa)
putative short chain dehydrogenase bin=GWC2_Methylomirabilis_70_24 species=Pseudonocardia sp. P1 genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
short-chain dehydrogenase/reductase SDR
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1525_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3757..4893
DNA (1137bp) protein (379aa)
3'-5' exonuclease bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3'-5' exonuclease
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_1525_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4997..5953
DNA (957bp) protein (319aa)
Hypothetical membrane protein bin=GWF2_Methylomirabilis_70_14 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1525_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6250..7014
DNA (765bp) protein (255aa)
2-deoxy-D-gluconate 3-dehydrogenase (EC:1.1.1.125)
2-deoxy-D-gluconate 3-dehydrogenase bin=GWF2_Methylomirabilis_70_14 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1525_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7040..7813
DNA (774bp) protein (258aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1525_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7818..8726
DNA (909bp) protein (303aa)
Lipid A biosynthesis acyltransferase bin=GWC2_Methylomirabilis_70_24 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
acyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_1525_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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8713..9870
DNA (1158bp) protein (386aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-oxoacyl-(acyl-carrier-protein) synthase 2
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 12 items

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