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PLM4_32_b1_sep16_scaffold_2364

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_2364_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3..1142)
DNA (1140bp) protein (380aa)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component, alpha subunit bin=GWC2_Methylomirabilis_70_24 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2364_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1174..2082
DNA (909bp) protein (303aa)
Homoserine kinase bin=GWC2_Methylomirabilis_70_24 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
homoserine kinase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2364_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2156..2677
DNA (522bp) protein (174aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase bin=GWC2_Methylomirabilis_70_24 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2364_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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2723..2926
DNA (204bp) protein (68aa)
Prokaryotic ubiquitin-like protein Pup bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2364_5
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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2963..3178
DNA (216bp) protein (72aa)
FmdB family regulatory protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0LCK4_9ACTO
FmdB family regulatory protein {ECO:0000313|EMBL:CCH21551.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
FmdB family regulatory protein
PLM4_32_b1_sep16_scaffold_2364_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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3299..3523
DNA (225bp) protein (75aa)
Transcriptional regulator, LysR family bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
LysR family transcriptional regulator
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2364_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3548..4072
DNA (525bp) protein (175aa)
Transcriptional regulator, LysR family bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
LysR family transcriptional regulator
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2364_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4188..5171
DNA (984bp) protein (328aa)
Selenide, water dikinase bin=GWC2_Methylomirabilis_70_24 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
selenide, water dikinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2364_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5498..6544
DNA (1047bp) protein (349aa)
Putative Glycosyl transferase, group 1 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Glycosyl transferase, group 1
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_2364_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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6758..7795
DNA (1038bp) protein (346aa)
ATPase associated with various cellular activities AAA_3 bin=GWC2_Methylomirabilis_70_24 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
MoxR-like ATPase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2364_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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7812..9296
DNA (1485bp) protein (495aa)
id=3287913 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2364_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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9286..10194
DNA (909bp) protein (303aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2364_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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10191..12578
DNA (2388bp) protein (796aa)
Conserved putative chloride channel bin=GWC2_Methylomirabilis_70_24 species=Syntrophomonas wolfei genus=Syntrophomonas taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
26S proteasome regulatory complex, subunit RPN10/PSMD4
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 13 items

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