ggKbase home page

PLM4_32_b1_sep16_scaffold_2450

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_2450_1
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..107
DNA (105bp) protein (35aa)
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
PLM4_32_b1_sep16_scaffold_2450_2
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

123..806
DNA (684bp) protein (228aa)
hypothetical protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B5534B
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
PLM4_32_b1_sep16_scaffold_2450_3
unknown

Not on your lists

843..1133
DNA (291bp) protein (97aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2450_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(1475..3898)
DNA (2424bp) protein (808aa)
GAF domain protein bin=GWC2_Methylomirabilis_70_24 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
family 3 adenylate cyclase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2450_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4084..6165
DNA (2082bp) protein (694aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2450_6
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6302..6718)
DNA (417bp) protein (139aa)
Putative uncharacterized protein Tax=Saccharopolyspora spinosa RepID=Q6JHM1_9PSEU
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_32_b1_sep16_scaffold_2450_7
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

7083..8051
DNA (969bp) protein (323aa)
Putative lipoprotein bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lipoprotein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_2450_8
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8339..14026
DNA (5688bp) protein (1896aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleotide reductase family protein bin=GWF2_Methylomirabilis_70_14 species=Pelodictyon luteolum genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
PLM4_32_b1_sep16_scaffold_2450_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

14142..14273
DNA (132bp) protein (44aa)
ggt; gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 9 items

View Taxonomy