ggKbase home page

PLM4_32_b1_sep16_scaffold_3205

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_3205_1
unknown

Not on your lists

comp(1..117)
DNA (117bp) protein (39aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_3205_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

290..1651
DNA (1362bp) protein (454aa)
MmgE/PrpD family protein bin=GWC2_Methylomirabilis_70_16 species=Mesorhizobium loti genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3205_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1667..2452)
DNA (786bp) protein (262aa)
Abortive infection protein bin=GWA2_Methylomirabilis_73_35 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
abortive infection protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_b1_sep16_scaffold_3205_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(2528..3619)
DNA (1092bp) protein (364aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
cytochrome c
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3205_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3679..4407)
DNA (729bp) protein (243aa)
Branched-chain amino acid transport system ATP-binding protein bin=GWC2_Methylomirabilis_70_16 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter ATP-binding protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3205_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4404..5063)
DNA (660bp) protein (220aa)
Methyltransferase type 12 bin=GWC2_Methylomirabilis_70_24 species=Nakamurella multipartita genus=Nakamurella taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
type 12 methyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3205_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5041..6432)
DNA (1392bp) protein (464aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3205_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6489..7193)
DNA (705bp) protein (235aa)
ABC transport system protein bin=GWC2_Methylomirabilis_70_16 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_b1_sep16_scaffold_3205_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(7198..8118)
DNA (921bp) protein (307aa)
ABC-type transport system permease protein II (Probable substrates branched-chain/neutral amino acids) 2 bin=GWF2_Methylomirabilis_70_14 species=Marinobacter sp. ELB17 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3205_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8115..8993)
DNA (879bp) protein (293aa)
Inner-membrane translocator bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3205_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9086..10273)
DNA (1188bp) protein (396aa)
ABC-type branched-chain amino acid transport system, periplasmic component bin=GWF2_Methylomirabilis_70_14 species=Idiomarina sp. A28L genus=Idiomarina taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter substrate-binding protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_b1_sep16_scaffold_3205_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

10417..10701
DNA (285bp) protein (95aa)
Endoribonuclease L-PSP bin=GWA2_Methylomirabilis_73_35 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
translation initiation inhibitor
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 12 items

View Taxonomy