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PLM4_32_b1_sep16_scaffold_1516

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1516_1
unknown

Not on your lists

comp(2..151)
DNA (150bp) protein (50aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1516_2
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(126..1073)
DNA (948bp) protein (316aa)
Acetylglutamate kinase bin=GWA2_Elusimicrobia_69_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
acetylglutamate kinase
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM4_32_b1_sep16_scaffold_1516_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(1098..2120)
DNA (1023bp) protein (341aa)
N-acetylornithine carbamoyltransferase {ECO:0000313|EMBL:CDM65490.1}; EC=2.1.3.9 {ECO:0000313|EMBL:CDM65490.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
N-acetyl ornithine carbamoyltransferase Tax=Xanthomonas fuscans RepID=U4M1S5_9XANT
argF; N-acetyl ornithine carbamoyltransferase
PLM4_32_b1_sep16_scaffold_1516_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(2117..3256)
DNA (1140bp) protein (380aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
acetylornithine/succinyldiaminopimelate aminotransferase (EC:2.6.1.11)
Aminotransferase class-III Tax=Holophaga foetida DSM 6591 RepID=H1NYD2_9BACT
PLM4_32_b1_sep16_scaffold_1516_5
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3250..4281)
DNA (1032bp) protein (344aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.-)
N-acetyl-gamma-glutamyl-phosphate reductase bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM4_32_b1_sep16_scaffold_1516_6
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4281..5360)
DNA (1080bp) protein (360aa)
Uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM4_32_b1_sep16_scaffold_1516_7
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(5360..6577)
DNA (1218bp) protein (406aa)
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase bin=GWA2_Elusimicrobia_69_24 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=GWA2_Elusimicrobia_69_24_curated
PLM4_32_b1_sep16_scaffold_1516_8
unknown

Not on your lists

comp(6638..7087)
DNA (450bp) protein (150aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1516_9

Not on your lists

comp(7092..7529)
DNA (438bp) protein (146aa)
hypothetical protein Tax=Kordiimonas gwangyangensis RepID=UPI0003639004
Uncharacterized protein {ECO:0000313|EMBL:KKM25584.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
endoribonuclease L-PSP
PLM4_32_b1_sep16_scaffold_1516_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7667..8017)
DNA (351bp) protein (117aa)
Peptidase S9 prolyl oligopeptidase active site domain protein Tax=Rhodopirellula sp. SWK7 RepID=M5T4Z2_9PLAN
dipeptidyl aminopeptidase/acylaminoacyl peptidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_b1_sep16_scaffold_1516_11
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(8049..8738)
DNA (690bp) protein (230aa)
hypothetical protein Tax=Saccharopolyspora spinosa RepID=UPI000237B0A9
Uncharacterized protein {ECO:0000313|EMBL:KIJ80452.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
Hypothetical protein
PLM4_32_b1_sep16_scaffold_1516_12
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(8795..9604)
DNA (810bp) protein (270aa)
type 12 methyltransferase Tax=Schlesneria paludicola RepID=UPI00029A4ADD
type 12 methyltransferase
Tax=CG_Arma_01
PLM4_32_b1_sep16_scaffold_1516_13
unknown

Not on your lists

comp(9626..9967)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1516_14
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10090..11286)
DNA (1197bp) protein (399aa)
putative penicillin-binding protein 1B (EC:2.4.1.129 3.4.-.-)
Putative Penicillin-binding protein 1B Tax=Candidatus Nitrospira defluvii RepID=D8PJ37_9BACT
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM4_32_b1_sep16_scaffold_1516_15
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

12427..12717
DNA (291bp) protein (97aa)
D-alanine--poly(phosphoribitol) ligase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00565}; EC=6.1.1.13 {ECO:0000256|HAMAP-Rule:MF_00565};; D-alanyl carrier protein {ECO:0000256|HAMAP-Rule:MF_00565}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
D-alanine--poly(phosphoribitol) ligase (EC:6.1.1.13)
D-alanine--poly(phosphoribitol) ligase subunit 2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D0J2_9BACT
PLM4_32_b1_sep16_scaffold_1516_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

12714..13958
DNA (1245bp) protein (415aa)
DltD central domain protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D0J3_9BACT
DltD central domain protein {ECO:0000313|EMBL:EDY19855.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
alanine transporter
PLM4_32_b1_sep16_scaffold_1516_17
unknown

Not on your lists

13942..14076
DNA (135bp) protein (45aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1516_18
CG_Anaero_03, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

14076..15545
DNA (1470bp) protein (490aa)
dltA; D-alanine--poly(phosphoribitol) ligase, subunit 1 (EC:6.1.1.13)
D-alanine--poly(phosphoribitol) ligase subunit 1 Tax=Bacillus pseudomycoides DSM 12442 RepID=C3BHU7_9BACI
Tax=CG_Anaero_03
PLM4_32_b1_sep16_scaffold_1516_19
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15564..16982
DNA (1419bp) protein (473aa)
D-alanyl-lipoteichoic acid biosynthesis protein DltB Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XZM1_9FIRM
D-alanyl-lipoteichoic acid biosynthesis protein DltB {ECO:0000313|EMBL:EHQ91995.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
D-alanyl-lipoteichoic acid biosynthesis protein DltB
PLM4_32_b1_sep16_scaffold_1516_20
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

16967..18124
DNA (1158bp) protein (386aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7V8_GEMAT
amidohydrolase 2
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_32_b1_sep16_scaffold_1516_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18147..19412)
DNA (1266bp) protein (422aa)
RNA polymerase subunit sigma-24 Tax=Sorangium cellulosum So0157-2 RepID=S4XHY5_SORCE
RNA polymerase subunit sigma-24
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:AGP32752.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM4_32_b1_sep16_scaffold_1516_22
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(19545..19727)
DNA (183bp) protein (61aa)
DGPFAETKE family protein Tax=Burkholderia RepID=I0Y5C8_9BURK bin=RBG9 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=RBG9 organism_group=Chloroflexi
dgpf family protein
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
PLM4_32_b1_sep16_scaffold_1516_23
RBG_13_Chloroflexi_60_13_curated, Chloroflexi, Bacteria

Not on your lists

comp(19724..19951)
DNA (228bp) protein (76aa)
Dehydrogenase Tax=Sorangium cellulosum So0157-2 RepID=S4XPQ3_SORCE
dehydrogenase
Tax=RBG_13_Chloroflexi_60_13_curated
PLM4_32_b1_sep16_scaffold_1516_24
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19986..20348)
DNA (363bp) protein (121aa)
Uncharacterized protein conserved in bacteria Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SAR8_HAHCH
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:ABC32256.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
PLM4_32_b1_sep16_scaffold_1516_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(20463..21941)
DNA (1479bp) protein (493aa)
Amino acid transporter Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9U4_SINAD
Amino acid/polyamine/organocation transporter, APC superfamily (TC 2.A.3) {ECO:0000313|EMBL:CDM66820.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
amino acid transporter
PLM4_32_b1_sep16_scaffold_1516_26
RLO_PLX_64_10, Bacteria

Not on your lists

comp(21934..22710)
DNA (777bp) protein (259aa)
Ubiquinone/menaquinone biosynthesis methyltransferase ubiE Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8RZA9_ACTS5
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_32_b1_sep16_scaffold_1516_27
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22723..23193)
DNA (471bp) protein (157aa)
Putative uncharacterized protein Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A4Y0_ALKEH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI58107.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
PLM4_32_b1_sep16_scaffold_1516_28
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

23457..23675
DNA (219bp) protein (73aa)
Cold shock protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAI3_GEMAT
cold shock protein
Cold shock protein {ECO:0000313|EMBL:BAH39781.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_32_b1_sep16_scaffold_1516_29
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

23775..24257
DNA (483bp) protein (161aa)
Glr0686 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NMS9_GLOVI
hypothetical protein
Glr0686 protein {ECO:0000313|EMBL:BAC88627.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM4_32_b1_sep16_scaffold_1516_30
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24479..25588
DNA (1110bp) protein (370aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020L6_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:KFE63942.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
permease
Displaying items 1-30 of 31 in total

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