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PLM4_32_b1_sep16_scaffold_1581

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1581_1
unknown

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comp(1..414)
DNA (414bp) protein (138aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1581_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(401..901)
DNA (501bp) protein (167aa)
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC64_GEMAT
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:BAH40091.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_32_b1_sep16_scaffold_1581_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(898..2976)
DNA (2079bp) protein (693aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I866_CALAS
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_1581_4
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3143..3817)
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9C8_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH39105.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_32_b1_sep16_scaffold_1581_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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4145..5026
DNA (882bp) protein (294aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XE9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ85666.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_32_b1_sep16_scaffold_1581_trna_1
unknown

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5067..5140
DNA (74bp)
transferRNA His
PLM4_32_b1_sep16_scaffold_1581_trna_2
unknown

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5181..5253
DNA (73bp)
transferRNA Trp
PLM4_32_b1_sep16_scaffold_1581_trna_3
unknown

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5289..5361
DNA (73bp)
transferRNA Glu
PLM4_32_b1_sep16_scaffold_1581_trna_4
unknown

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5378..5449
DNA (72bp)
transferRNA Glu
PLM4_32_b1_sep16_scaffold_1581_trna_5
unknown

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5463..5535
DNA (73bp)
transferRNA Lys
PLM4_32_b1_sep16_scaffold_1581_6
Chromobacterium piscinae, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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5686..6699
DNA (1014bp) protein (338aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase bin=GWC2_Clostridiales_40_7 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
UDP-galactose-4-epimerase {ECO:0000313|EMBL:KIA82249.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium piscinae.;"
PLM4_32_b1_sep16_scaffold_1581_7
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6696..8012)
DNA (1317bp) protein (439aa)
Aspartate aminotransferase Tax=Cystobacter fuscus DSM 2262 RepID=S9QF83_9DELT
Aspartate aminotransferase {ECO:0000313|EMBL:EPX59989.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
aatB; class I aminotransferase
PLM4_32_b1_sep16_scaffold_1581_8
CG_Mariprof_03, Zetaproteobacteria, Proteobacteria, Bacteria

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8110..8793
DNA (684bp) protein (228aa)
XRE family transcriptional regulator Tax=Aureimonas ureilytica RepID=UPI000362B837
two component transcriptional regulator
Tax=CG_Mariprof_03
PLM4_32_b1_sep16_scaffold_1581_9
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8795..10183
DNA (1389bp) protein (463aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
Two-component sensor histidine kinase transcription regulator protein Tax=Janthinobacterium sp. HH01 RepID=L9PDK3_9BURK
integral membrane sensor signal transduction histidine kinase
PLM4_32_b1_sep16_scaffold_1581_10
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

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comp(10180..12186)
DNA (2007bp) protein (669aa)
tolB; peptidase S9 prolyl oligopeptidase active site domain protein (EC:3.4.19.1)
Peptidase S9, prolyl oligopeptidase active site region Tax=Luminiphilus syltensis NOR5-1B RepID=B8KVS6_9GAMM
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
PLM4_32_b1_sep16_scaffold_1581_11
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12338..13024
DNA (687bp) protein (229aa)
Beta-lactamase Tax=Janthinobacterium sp. HH01 RepID=L9PLB2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFE63737.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
beta-lactamase
Displaying 16 items

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