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PLM4_32_b1_sep16_scaffold_1700

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_1700_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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1..1122
DNA (1122bp) protein (374aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
acriflavin resistance protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1700_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1407..3119
DNA (1713bp) protein (571aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA gyrase subunit A Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L6_GEMAT
DNA gyrase subunit A
PLM4_32_b1_sep16_scaffold_1700_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3064..3864
DNA (801bp) protein (267aa)
DNA gyrase subunit A Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L6_GEMAT
Suspect SCG annotation. See neighboring gene [PLM4_32_b1_sep16_scaffold_1700_2].
DNA gyrase subunit A
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1700_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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3890..4834
DNA (945bp) protein (315aa)
serine/threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase Tax=Streptomyces ghanaensis ATCC 14672 RepID=D5ZZW2_9ACTO
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1700_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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4836..5687
DNA (852bp) protein (284aa)
Putative two-component response regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L7_GEMAT
putative two-component response regulator
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1700_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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5851..6726
DNA (876bp) protein (292aa)
protein kinase (EC:2.7.11.1)
Protein kinase Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKW5_SORC5
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_1700_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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6775..8388
DNA (1614bp) protein (538aa)
Uncharacterized protein Tax=uncultured bacterium FPPZ_5C6 RepID=S4WA17_9BACT
metallopeptidase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1700_8
unknown

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8512..9195
DNA (684bp) protein (228aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1700_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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9666..10250
DNA (585bp) protein (195aa)
Saccharopine dehydrogenase family protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N3_GEMAT
Saccharopine dehydrogenase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1700_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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10260..10775
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AFV3_IGNAJ
hypothetical protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1700_11

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comp(10772..11962)
DNA (1191bp) protein (397aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA10983.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM4_32_b1_sep16_scaffold_1700_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(11966..13015)
DNA (1050bp) protein (350aa)
Putative asparaginase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5P9_GEMAT
putative asparaginase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1700_13
unknown

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13122..13790
DNA (669bp) protein (223aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_1700_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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13787..14845
DNA (1059bp) protein (353aa)
Quinolinate phosphoribosyl transferase Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2Y5_CONWI
quinolinate phosphoribosyl transferase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1700_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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14842..15471
DNA (630bp) protein (210aa)
Isochorismatase hydrolase bin=GWF2_Planctomycete_41_51 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1700_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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15621..16532
DNA (912bp) protein (304aa)
Aminotransferase class V Tax=uncultured prokaryote RepID=H5SIQ3_9ZZZZ
aminotransferase class V
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_1700_17
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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16529..17092
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=Brevibacillus sp. BC25 PF94_9BACL">RepID=J2PF94_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EJL25927.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. BC25.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_1700_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

17214..18014
DNA (801bp) protein (267aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_1700_19
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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18034..19938
DNA (1905bp) protein (635aa)
hypothetical protein Tax=Dyadobacter beijingensis RepID=UPI000376C8A3
Sulfatase {ECO:0000313|EMBL:AHM60119.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
sulfatase
PLM4_32_b1_sep16_scaffold_1700_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(19954..21603)
DNA (1650bp) protein (550aa)
Glucose-methanol-choline oxidoreductase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN91_KORVE
glucose-methanol-choline oxidoreductase
Glucose-methanol-choline oxidoreductase {ECO:0000313|EMBL:ABF41659.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_32_b1_sep16_scaffold_1700_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(21607..22185)
DNA (579bp) protein (193aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN90_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41660.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_32_b1_sep16_scaffold_1700_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(22259..23197)
DNA (939bp) protein (313aa)
L-proline dehydrogenase (EC:1.5.99.8)
Proline dehydrogenase bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_1700_23
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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23207..24376
DNA (1170bp) protein (390aa)
UPF0061 protein COCOR_00752 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MHH3_CORCM
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
Displaying 23 items

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