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PLM4_32_b1_sep16_scaffold_4583

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_4583_1
unknown

Not on your lists

1..198
DNA (198bp) protein (66aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_4583_2
unknown

Not on your lists

comp(279..773)
DNA (495bp) protein (165aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_4583_trna_2
unknown

Not on your lists

comp(1001..1074)
DNA (74bp)
transferRNA Pro
PLM4_32_b1_sep16_scaffold_4583_3
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

comp(1094..1885)
DNA (792bp) protein (264aa)
HpcH/HpaI aldolase Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NHJ6_ROSCS
HpcH/HpaI aldolase
Tax=RBG_13_Spirochaetes_68_11_curated
PLM4_32_b1_sep16_scaffold_4583_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists


comp(1882..2517)
DNA (636bp) protein (212aa)
Non-canonical purine NTP pyrophosphatase Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CS84_TRURR
Nucleoside-triphosphatase rdgB
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_4583_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2514..3149)
DNA (636bp) protein (212aa)
ribonuclease PH Tax=Salinispora pacifica RepID=UPI00037B4AE2
Ribonuclease PH
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_4583_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(3136..3615)
DNA (480bp) protein (160aa)
nucleotidyltransferase Tax=Desulfovibrio oxyclinae RepID=UPI00037C30C0
rfaE bifunctional protein
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_4583_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3619..3990)
DNA (372bp) protein (124aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_4583_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3984..4514)
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Q1_GEMAT
Rare lipoprotein B
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_4583_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(4453..5160)
DNA (708bp) protein (236aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_4583_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5157..5591)
DNA (435bp) protein (145aa)
Putative hydrolase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P8_GEMAT
putative hydrolase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_4583_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5645..6376
DNA (732bp) protein (244aa)
Calcineurin-like phosphoesterase superfamily domain protein
Putative uncharacterized protein bin=GWE2_Bacteroidetes_29_8 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_4583_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(6357..7124)
DNA (768bp) protein (256aa)
Glutamate racemase Tax=Azoarcus sp. KH32C RepID=H0PYZ4_9RHOO
Glutamate racemase
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_4583_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(7121..7558)
DNA (438bp) protein (146aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_4583_trna_1
unknown

Not on your lists

comp(7571..7664)
DNA (94bp)
transferRNA SeC(p)
PLM4_32_b1_sep16_scaffold_4583_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7689..8078)
DNA (390bp) protein (130aa)
Translation initiation inhibitor Tax=Aeromonas molluscorum 848 RepID=R1H904_9GAMM
regulator
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_4583_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8078..9730)
DNA (1653bp) protein (551aa)
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE57_GEMAT
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_4583_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(9727..10527)
DNA (801bp) protein (267aa)
hypothetical protein Tax=Chelatococcus sp. GW1 RepID=UPI0002F393EE
hydrolase, TatD family
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_4583_17
RLO_PLX_64_10, Bacteria

Not on your lists

comp(10537..13038)
DNA (2502bp) protein (834aa)
Protein-export membrane protein SecD Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4M8_MESOW
protein-export membrane protein SecD
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_32_b1_sep16_scaffold_4583_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13046..14002)
DNA (957bp) protein (319aa)
ribF; riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
Riboflavin kinase/FMN adenylyltransferase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P1_GEMAT
PLM4_32_b1_sep16_scaffold_4583_19
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(13999..14829)
DNA (831bp) protein (277aa)
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
tRNA pseudouridine synthase B (EC:4.2.1.70)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_32_b1_sep16_scaffold_4583_20
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(14844..15206)
DNA (363bp) protein (121aa)
Ribosome-binding factor A Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=RBFA_THERP
rbfA; ribosome-binding factor A
Ribosome-binding factor A {ECO:0000255|HAMAP-Rule:MF_00003}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM4_32_b1_sep16_scaffold_4583_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15217..17679)
DNA (2463bp) protein (821aa)
Translation initiation factor IF-2 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8N8_GEMAT
initiation factor 2
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying 23 items

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