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PLM4_32_b1_sep16_scaffold_2062

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_2062_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2..931)
DNA (930bp) protein (310aa)
Hydrolase, alpha/beta hydrolase fold having protein Tax=Cystobacter fuscus DSM 2262 RepID=S9QIS1_9DELT
alpha/beta fold family hydrolase
Alpha/beta fold family hydrolase {ECO:0000313|EMBL:AHG88699.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_2062_2
unknown

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comp(928..1080)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2062_3
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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comp(1077..1436)
DNA (360bp) protein (120aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036DA163
peptidase S9 prolyl oligopeptidase active site domain protein
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:ACR79890.1}; species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
PLM4_32_b1_sep16_scaffold_2062_4
unknown

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3026..3526
DNA (501bp) protein (167aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2062_5
unknown

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3531..4085
DNA (555bp) protein (185aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2062_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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4244..5509
DNA (1266bp) protein (422aa)
two component, sigma54 specific, Fis family transcriptional regulator bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
two component, sigma54 specific, transcriptional regulator, Fis family
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_2062_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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6070..7251
DNA (1182bp) protein (394aa)
Integral membrane sensor signal transduction histidine kinase Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H7Y7_ANADF
integral membrane sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_32_b1_sep16_scaffold_2062_8
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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7390..9264
DNA (1875bp) protein (625aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI00035E061C
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
PLM4_32_b1_sep16_scaffold_2062_9
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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9295..10296
DNA (1002bp) protein (334aa)
cytochrome-c peroxidase (EC:1.11.1.5)
Cytochrome-c peroxidase {ECO:0000313|EMBL:ADB18598.1}; EC=1.11.1.5 {ECO:0000313|EMBL:ADB18598.1};; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
Cytochrome-c peroxidase Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R1Y7_PIRSD
PLM4_32_b1_sep16_scaffold_2062_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

10363..12096
DNA (1734bp) protein (578aa)
hypothetical protein Tax=Methyloversatilis sp. NVD RepID=UPI00035FE049
gatA; amidase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_32_b1_sep16_scaffold_2062_11
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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12096..13076
DNA (981bp) protein (327aa)
Homocysteine S-methyltransferase Tax=Chloroflexus RepID=A9WHG0_CHLAA
mmuM; homocysteine methyltransferase
Homocysteine S-methyltransferase {ECO:0000313|EMBL:ABY36286.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
PLM4_32_b1_sep16_scaffold_2062_12

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comp(13037..13393)
DNA (357bp) protein (119aa)
Marine sediment metagenome DNA, contig: S06H3_S22768 {ECO:0000313|EMBL:GAI49327.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_32_b1_sep16_scaffold_2062_13
unknown

Not on your lists

13532..14044
DNA (513bp) protein (171aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI000344C3D3
dyp-type peroxidase family protein
PLM4_32_b1_sep16_scaffold_2062_14
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

14049..14984
DNA (936bp) protein (312aa)
Uncharacterized protein Tax=Microcystis aeruginosa PCC 9807 RepID=I4H022_MICAE
Uncharacterized protein {ECO:0000313|EMBL:CCI15396.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9807.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_2062_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15008..18259)
DNA (3252bp) protein (1084aa)
Glycosyl hydrolase, BNR repeat-containing protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q026X0_SOLUE
BNR repeat-containing glycosyl hydrolase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_2062_16
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(18357..19844)
DNA (1488bp) protein (496aa)
Metallophosphoesterase Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SAD2_INTC7
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ADU49380.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM4_32_b1_sep16_scaffold_2062_17
unknown

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20104..20937
DNA (834bp) protein (278aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_2062_18
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

20919..24179
DNA (3261bp) protein (1087aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN33596.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
PLM4_32_b1_sep16_scaffold_2062_19
R_RIF_OD1_11_43_32b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

24911..25828
DNA (918bp) protein (306aa)
hypothetical protein Tax=Thermus oshimai RepID=UPI000380BE86
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_43_32b_curated
PLM4_32_b1_sep16_scaffold_2062_20
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25921..26652
DNA (732bp) protein (244aa)
Short-chain dehydrogenase/reductase family protein Tax=Plesiocystis pacifica SIR-1 RepID=A6G492_9DELT
Short-chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EDM79415.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
PLM4_32_b1_sep16_scaffold_2062_21
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26662..27906
DNA (1245bp) protein (415aa)
Major facilitator superfamily MFS_1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QRF4_SPILD
Major facilitator transporter {ECO:0000313|EMBL:GAK45845.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
major facilitator superfamily protein
PLM4_32_b1_sep16_scaffold_2062_22
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27912..28802
DNA (891bp) protein (297aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
hypothetical protein Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00036F27F6
2-dehydropantoate 2-reductase
Displaying 22 items

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