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PLM4_32_b1_sep16_scaffold_3896

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_3896_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(3..524)
DNA (522bp) protein (174aa)
Macrolide-specific efflux protein MacA Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FQP0_STIAD bin=16ft_combo_ws3_JS1 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
efflux transporter, RND family, MFP subunit
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_3896_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(524..1276)
DNA (753bp) protein (251aa)
Putative ABC transporter ATP-binding protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H8_GEMAT
ABC transporter related protein
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_b1_sep16_scaffold_3896_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1273..2571)
DNA (1299bp) protein (433aa)
Putative outer membrane macrolide efflux protein Tax=Myxococcus RepID=Q1D4Q0_MYXXD bin=16ft_combo_ws3_JS1 species=unknown genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
putative outer membrane macrolide efflux protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_3896_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2558..2938)
DNA (381bp) protein (127aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM4_32_b1_sep16_scaffold_3896_5
unknown

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comp(2935..3282)
DNA (348bp) protein (116aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_3896_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(3279..3671)
DNA (393bp) protein (131aa)
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT
RNA polymerase sigma factor, sigma-70 family
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_3896_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3961..5301)
DNA (1341bp) protein (447aa)
Cardiolipin synthase Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8N0A1_CORCM
cls3; cardiolipin synthase
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_b1_sep16_scaffold_3896_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5355..5927)
DNA (573bp) protein (191aa)
Metal dependent phosphohydrolase Tax=uncultured candidate division OP1 bacterium RepID=H5SJK6_9BACT
metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Displaying 8 items

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