ggKbase home page

PLM4_32_b1_sep16_scaffold_3907

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_b1_sep16_scaffold_3907_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..468)
DNA (468bp) protein (156aa)
Glutamine amidotransferase class-I family protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A843_GEMAT
peptidase C26
Peptidase C26 {ECO:0000313|EMBL:AHG87956.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_3907_2
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(465..1574)
DNA (1110bp) protein (370aa)
carboxylate-amine ligase (EC:6.3.-.-); K06048 carboxylate-amine ligase [EC:6.3.-.-] bin=bin9_gal15 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin9_gal15 organism_group=GAL15
Carboxylate-amine ligase ybdK
Tax=CSP1_3_Armatimonadetes
PLM4_32_b1_sep16_scaffold_3907_3
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1599..2642)
DNA (1044bp) protein (348aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A842_GEMAT
hypothetical protein
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM4_32_b1_sep16_scaffold_3907_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2681..3862)
DNA (1182bp) protein (394aa)
glutathione synthase Tax=Gemmata obscuriglobus RepID=UPI00016C532C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87959.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_3907_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3957..4676)
DNA (720bp) protein (240aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I4W7_CALAS
esterase
Esterase {ECO:0000313|EMBL:AHG87960.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_3907_6
unknown

Not on your lists

comp(4673..5206)
DNA (534bp) protein (178aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_3907_7
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(5225..6043)
DNA (819bp) protein (273aa)
Putative esterase Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BD84_MEISD
putative esterase
Putative esterase {ECO:0000313|EMBL:ADH63002.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
PLM4_32_b1_sep16_scaffold_3907_8
unknown

Not on your lists

6260..6922
DNA (663bp) protein (221aa)

This feature has no annotations

PLM4_32_b1_sep16_scaffold_3907_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7036..8493)
DNA (1458bp) protein (486aa)
TonB-dependent receptor Tax=Azospirillum amazonense Y2 RepID=G1XWV2_9PROT
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AHG90535.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_3907_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8562..9656)
DNA (1095bp) protein (365aa)
TonB-dependent receptor Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GM88_9SPHI
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AHG90535.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_b1_sep16_scaffold_3907_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9689..12277)
DNA (2589bp) protein (863aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
TonB-dependent receptor
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_b1_sep16_scaffold_3907_12
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12383..13507)
DNA (1125bp) protein (375aa)
hypothetical protein Tax=Nafulsella turpanensis RepID=UPI0003468E16
Uncharacterized protein {ECO:0000313|EMBL:KAJ01751.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus.;"
hypothetical protein
PLM4_32_b1_sep16_scaffold_3907_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13594..15693
DNA (2100bp) protein (700aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A833_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38393.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_32_b1_sep16_scaffold_3907_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(15665..16666)
DNA (1002bp) protein (334aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI0003690B65
putative oxidoreductase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_32_b1_sep16_scaffold_3907_15
CG_Mariprof_05, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16663..17175)
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A859_GEMAT
hypothetical protein
Tax=CG_Mariprof_05
PLM4_32_b1_sep16_scaffold_3907_16
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

17317..18516
DNA (1200bp) protein (400aa)
Hypothetical conserved protein Tax=uncultured Acidobacteria bacterium RepID=H5SBT5_9BACT
Hypothetical conserved protein {ECO:0000313|EMBL:BAL53621.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
Displaying 16 items

View Taxonomy