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PLM4_32_coex_redo_sep16_scaffold_2075

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_2075_1
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

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3..1055
DNA (1053bp) protein (351aa)
Diguanylate phosphodiesterase bin=GWC2_Nitrospirae_57_13 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
diguanylate phosphodiesterase
Tax=BJP_08E140C01_Coriobacteriales_62_12
PLM4_32_coex_redo_sep16_scaffold_2075_2
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1052..3382
DNA (2331bp) protein (777aa)
Multi-sensor signal transduction histidine kinase Tax=Pedosphaera parvula Ellin514 RepID=B9XGC6_9BACT
PAS/PAC sensor signal transduction histidine kinase
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
PLM4_32_coex_redo_sep16_scaffold_2075_3
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(3366..4361)
DNA (996bp) protein (332aa)
rRNA methylase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDT2_CHLTF
rRNA methylase
rRNA methylase {ECO:0000313|EMBL:AEP12940.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_32_coex_redo_sep16_scaffold_2075_4
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4582..5529
DNA (948bp) protein (316aa)
Putative muramoyltetrapeptide carboxypeptidase Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67KK5_SYMTH
muramoyltetrapeptide carboxypeptidase
Putative muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:BAD41793.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
PLM4_32_coex_redo_sep16_scaffold_2075_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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5535..6323
DNA (789bp) protein (263aa)
truA; tRNA pseudouridine synthase A (EC:4.2.1.70)
tRNA pseudouridine synthase A bin=GWC2_Methylomirabilis_70_24 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_32_coex_redo_sep16_scaffold_2075_6
Paenibacillus sp. D9, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6335..7333
DNA (999bp) protein (333aa)
UDP-glucose 4-epimerase Tax=Paenibacillus sp. P22 RepID=T2LUN5_9BACL
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KKC47571.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. D9.;"
UDP-glucose 4-epimerase
PLM4_32_coex_redo_sep16_scaffold_2075_7
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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7417..8217
DNA (801bp) protein (267aa)
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_32_coex_redo_sep16_scaffold_2075_8
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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8214..9029
DNA (816bp) protein (272aa)
Phosphatidate cytidylyltransferase bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cdsA; phosphatidate cytidylyltransferase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_32_coex_redo_sep16_scaffold_2075_9
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

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9026..10183
DNA (1158bp) protein (386aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ADC2_THEID
PLM4_32_coex_redo_sep16_scaffold_2075_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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10180..11346
DNA (1167bp) protein (389aa)
Peptidase M50, putative membrane-associated zinc metallopeptidase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRS8_KORVE
peptidase M50, membrane-associated zinc metallopeptidase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 10 items

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