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PLM4_32_coex_redo_sep16_scaffold_2194

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_2194_1
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(2..1468)
DNA (1467bp) protein (489aa)
DNA polymerase III, alpha subunit bin=GWC2_Nitrospirae_57_13 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
DNA-directed DNA polymerase III (polc)
Tax=GWC2_Nitrospirae_57_13_curated
PLM4_32_coex_redo_sep16_scaffold_2194_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(1468..3015)
DNA (1548bp) protein (516aa)
guaA; GMP synthase; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
guaA; GMP synthase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_32_coex_redo_sep16_scaffold_2194_3
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3012..4067)
DNA (1056bp) protein (352aa)
DNA polymerase III subunit delta Tax=uncultured planctomycete RepID=H5SBZ5_9BACT
hypothetical protein
Tax=CG_Delta_03
PLM4_32_coex_redo_sep16_scaffold_2194_4
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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comp(4067..4576)
DNA (510bp) protein (170aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
PLM4_32_coex_redo_sep16_scaffold_2194_5
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4576..7071)
DNA (2496bp) protein (832aa)
leuS; leucine--tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:AJE04893.1}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:AJE04893.1};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
Leucine--tRNA ligase Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=SYL_GEOSL
PLM4_32_coex_redo_sep16_scaffold_2194_6
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(7068..7442)
DNA (375bp) protein (125aa)
N utilization substance protein B homolog bin=GWC2_Nitrospirae_57_13 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
N utilization substance protein B
Tax=GWC2_Nitrospirae_57_13_curated
PLM4_32_coex_redo_sep16_scaffold_2194_7
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(7499..7966)
DNA (468bp) protein (156aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
6,7-dimethyl-8-ribityllumazine synthase Tax=Bacillus sp. 1NLA3E RepID=N0B129_9BACI
ribH; 6,7-dimethyl-8-ribityllumazine synthase
PLM4_32_coex_redo_sep16_scaffold_2194_8
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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comp(8004..8915)
DNA (912bp) protein (304aa)
PfkB domain protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEU6_9BACT
PfkB domain-containing protein
PfkB domain protein {ECO:0000313|EMBL:CBE68275.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_32_coex_redo_sep16_scaffold_2194_9
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8997..11066
DNA (2070bp) protein (690aa)
Oligosaccharyl transferase STT3 subunit Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M2Y7_GEODF
oligosaccharyl transferase STT3 subunit
Membrane protein {ECO:0000313|EMBL:ACM21333.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
Displaying 9 items

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