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PLM4_32_coex_redo_sep16_scaffold_2352

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_2352_1
unknown

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1..369
DNA (369bp) protein (123aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_2352_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

366..1466
DNA (1101bp) protein (367aa)
glycine cleavage system T protein (EC:2.1.2.10)
Aminomethyltransferase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFJ0_CHLTF
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_coex_redo_sep16_scaffold_2352_3
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1478..1855
DNA (378bp) protein (126aa)
Glycine cleavage system H protein Tax=Niabella soli DSM 19437 RepID=H1NQM7_9SPHI
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
glycine cleavage system protein H
PLM4_32_coex_redo_sep16_scaffold_2352_4
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(1864..4716)
DNA (2853bp) protein (951aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
Glycine dehydrogenase (decarboxylating) Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HVC6_CYAP4
glycine dehydrogenase
PLM4_32_coex_redo_sep16_scaffold_2352_5
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4718..5341)
DNA (624bp) protein (208aa)
Maf-like protein COCOR_05402 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MXI4_CORCM
maf1; maf protein
Maf-like protein COCOR_05402 {ECO:0000256|HAMAP-Rule:MF_00528}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM4_32_coex_redo_sep16_scaffold_2352_6
CG_Elusi_05, Elusimicrobia, Bacteria

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5385..6449
DNA (1065bp) protein (355aa)
5'-nucleotidase/2' 3'-cyclic phosphodiesterase-like esterase Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SM35_PLABD
5'-nucleotidase
Tax=CG_Elusi_05
PLM4_32_coex_redo_sep16_scaffold_2352_7
unknown

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comp(6296..6637)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_2352_8
unknown

Not on your lists

comp(6837..7046)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_2352_9
unknown

Not on your lists

7343..7645
DNA (303bp) protein (101aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_2352_10
unknown

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comp(7642..8268)
DNA (627bp) protein (209aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_2352_11
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8999..9490
DNA (492bp) protein (164aa)
conserved hypothetical protein
hypothetical protein bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=CG_Delta_01
PLM4_32_coex_redo_sep16_scaffold_2352_12
unknown

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9500..10132
DNA (633bp) protein (211aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_2352_13
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

10129..11313
DNA (1185bp) protein (395aa)
aspartate transaminase (EC:2.6.1.1)
Aspartate transaminase Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B4M3_DESCC
Uncharacterized protein {ECO:0000313|EMBL:KDA53416.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
PLM4_32_coex_redo_sep16_scaffold_2352_14
Acetobacter orleanensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11403..12827
DNA (1425bp) protein (475aa)
hypothetical protein Tax=Caulobacter RepID=UPI000361D2BB
Uncharacterized protein {ECO:0000313|EMBL:GAN69491.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter orleanensis JCM 7639.;"
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_2352_15
unknown

Not on your lists

comp(12824..13363)
DNA (540bp) protein (180aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_2352_trna_1
unknown

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comp(13598..13681)
DNA (84bp)
transferRNA Leu
PLM4_32_coex_redo_sep16_scaffold_2352_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

13734..15512
DNA (1779bp) protein (593aa)
RNAse R (EC:3.1.-.-)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Ribonuclease R Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VX0_SOLUE
PLM4_32_coex_redo_sep16_scaffold_2352_17
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15558..16106
DNA (549bp) protein (183aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IME8_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62893.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_2352_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

16174..16815
DNA (642bp) protein (214aa)
Rhodanese homology domain superfamily protein Tax=Geobacter metallireducens RepID=Q39R91_GEOMG
sulfurtransferase
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_coex_redo_sep16_scaffold_2352_19
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

16815..17252
DNA (438bp) protein (146aa)
DoxX family protein bin=GWB2_Ignavibacteria_35_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
DoxX family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_coex_redo_sep16_scaffold_2352_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists


comp(17253..17525)
DNA (273bp) protein (91aa)
30S ribosomal protein S20 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GLQ5_SPICD
30S ribosomal protein S20
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM4_32_coex_redo_sep16_scaffold_2352_21
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(17558..18373)
DNA (816bp) protein (272aa)
hypothetical protein bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
lipoprotein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_32_coex_redo_sep16_scaffold_2352_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(18370..18912)
DNA (543bp) protein (181aa)
Peptidoglycan-associated lipoprotein Tax=Geobacter sp. (strain M18) RepID=E8WR12_GEOS8
peptidoglycan-associated lipoprotein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Displaying 23 items

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