ggKbase home page

PLM4_32_coex_redo_sep16_scaffold_2687

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_2687_1
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..279
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Arthrobacter sp. Rue61a RepID=J7LX24_9MICC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR31143.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
PLM4_32_coex_redo_sep16_scaffold_2687_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

641..1411
DNA (771bp) protein (257aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000361A43B
aminoglycoside/hydroxyurea antibiotic resistance kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_coex_redo_sep16_scaffold_2687_3
unknown

Not on your lists

1418..1882
DNA (465bp) protein (155aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_2687_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1879..2469
DNA (591bp) protein (197aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IK97_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF42703.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_32_coex_redo_sep16_scaffold_2687_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2466..2864
DNA (399bp) protein (133aa)
Putative acetyltransferase, GNAT family Tax=Variovorax paradoxus B4 RepID=T1XKA7_VARPD
putative acetyltransferase, GNAT family
Putative acetyltransferase, GNAT family {ECO:0000313|EMBL:AGU52729.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
PLM4_32_coex_redo_sep16_scaffold_2687_6
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2886..3089
DNA (204bp) protein (68aa)
hypothetical protein bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=CSP1_8_Deltaproteobacteria
PLM4_32_coex_redo_sep16_scaffold_2687_7
unknown

Not on your lists

3086..3598
DNA (513bp) protein (171aa)
hypothetical protein Tax=Vibrio breoganii RepID=UPI000369236E
PLM4_32_coex_redo_sep16_scaffold_2687_8
unknown

Not on your lists

3608..3700
DNA (93bp) protein (31aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_2687_9
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

3764..4234
DNA (471bp) protein (157aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Desulfosporosinus orientis genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_coex_redo_sep16_scaffold_2687_10
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4244..4681
DNA (438bp) protein (146aa)
Mll2045 protein Tax=Rhizobium loti (strain MAFF303099) RepID=Q98J91_RHILO
Uncharacterized protein {ECO:0000313|EMBL:KFC58758.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_2687_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4722..5609
DNA (888bp) protein (296aa)
Dienelactone hydrolase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q9_GEMAT
dienelactone hydrolase
Dienelactone hydrolase {ECO:0000313|EMBL:BAH39236.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM4_32_coex_redo_sep16_scaffold_2687_12
unknown

Not on your lists

5616..6008
DNA (393bp) protein (131aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_2687_13
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6005..6469
DNA (465bp) protein (155aa)
id=4349217 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Putative uncharacterized protein {ECO:0000313|EMBL:EDY87527.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
PLM4_32_coex_redo_sep16_scaffold_2687_14
unknown

Not on your lists

6466..6555
DNA (90bp) protein (30aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_2687_15

Not on your lists

6689..7405
DNA (717bp) protein (239aa)
hypothetical protein Tax=Catenovulum agarivorans RepID=UPI000317CA81
Cupin domain protein {ECO:0000313|EMBL:AIA12254.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM4_32_coex_redo_sep16_scaffold_2687_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7402..8136
DNA (735bp) protein (245aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XX98_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP37139.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM4_32_coex_redo_sep16_scaffold_2687_17
RLO_PLX_64_10, Bacteria

Not on your lists

8184..9323
DNA (1140bp) protein (380aa)
hypothetical protein Tax=Paenibacillus terrigena RepID=UPI00036E7B67
alcohol dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_32_coex_redo_sep16_scaffold_2687_18
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

9334..9861
DNA (528bp) protein (176aa)
Uncharacterized protein bin=GWB2_Deltaproteobacteria_65_81 species=unknown genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=GWA2_Ignavibacteria_54_16_curated
PLM4_32_coex_redo_sep16_scaffold_2687_19
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

9865..10098
DNA (234bp) protein (78aa)
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 19 items

View Taxonomy