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PLM4_32_coex_redo_sep16_scaffold_7724

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_7724_1
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(2..2779)
DNA (2778bp) protein (926aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta Tax=Solibacter usitatus (strain Ellin6076) RepID=RPOB_SOLUE
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_32_coex_redo_sep16_scaffold_7724_2
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2965..3339)
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 Tax=Magnetospirillum gryphiswaldense RepID=A4U4C9_9PROT
rplL; 50S ribosomal subunit protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense.;"
PLM4_32_coex_redo_sep16_scaffold_7724_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(3389..3916)
DNA (528bp) protein (176aa)
hypothetical protein Tax=Blastomonas sp. AAP53 RepID=UPI0003666C0B
rplJ; 50S ribosomal protein L10
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_32_coex_redo_sep16_scaffold_7724_4
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(3925..4626)
DNA (702bp) protein (234aa)
50S ribosomal protein L1 Tax=Koribacter versatilis (strain Ellin345) RepID=RL1_KORVE
rplA; 50S ribosomal protein L1
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_32_coex_redo_sep16_scaffold_7724_5
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4646..5071)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
50S ribosomal protein L11
50S ribosomal protein L11 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
PLM4_32_coex_redo_sep16_scaffold_7724_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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comp(5072..5623)
DNA (552bp) protein (184aa)
transcription antitermination protein nusG; K02601 transcriptional antiterminator NusG bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcription antitermination protein nusG
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM4_32_coex_redo_sep16_scaffold_7724_7
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

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comp(5620..5835)
DNA (216bp) protein (72aa)
preprotein translocase subunit SecE
Preprotein translocase, SecE subunit bin=GWF2_Methylomirabilis_70_14 species=Ruminococcus albus genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RBG_16_RIF03_38_10_curated
PLM4_32_coex_redo_sep16_scaffold_7724_8
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5840..5989)
DNA (150bp) protein (50aa)
rpmG; 50S ribosomal protein L33
50S ribosomal protein L33 bin=GWF2_Geobacter_54_21 species=unknown genus=unknown taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Geobacter_54_21 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWC2_Geobacteraceae_53_11_curated
PLM4_32_coex_redo_sep16_scaffold_7724_9
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(5993..6130)
DNA (138bp) protein (46aa)
Elongation factor Tu Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UXH6_TERSS
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
Displaying 9 items

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