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PLM4_32_coex_redo_sep16_scaffold_160

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_160_1
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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1..798
DNA (798bp) protein (266aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase Tax=alpha proteobacterium BAL199 RepID=A8U357_9PROT
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:EDP61411.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
PLM4_32_coex_redo_sep16_scaffold_160_2
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

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798..1745
DNA (948bp) protein (316aa)
NAD-dependent epimerase/dehydratase; K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
NAD-dependent epimerase/dehydratase
Tax=CSP1_8_Deltaproteobacteria
PLM4_32_coex_redo_sep16_scaffold_160_3
RBG_13_Aminicenantes_64_14_curated, Aminicenantes, Bacteria

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1742..2791
DNA (1050bp) protein (350aa)
Putative nucleotidyl transferase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I9R6_CALAS
putative nucleotidyl transferase
Tax=RBG_13_Aminicenantes_64_14_curated
PLM4_32_coex_redo_sep16_scaffold_160_4
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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2788..4269
DNA (1482bp) protein (494aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIN7_9BACT
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CBE69394.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
PLM4_32_coex_redo_sep16_scaffold_160_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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4266..5366
DNA (1101bp) protein (367aa)
UDP-N-acetylglucosamine 2-epimerase Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IHI5_ANADE
UDP-N-acetylglucosamine 2-epimerase
Tax=RBG_16_Nitrospirae_64_22_curated
PLM4_32_coex_redo_sep16_scaffold_160_6
unknown

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5363..6649
DNA (1287bp) protein (429aa)
Uncharacterized protein Tax=Azospirillum sp. CAG:239 RepID=R6J8J5_9PROT
peptidase M48 family protein
PLM4_32_coex_redo_sep16_scaffold_160_7
R_Gallionellales_57_47, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6677..8110
DNA (1434bp) protein (478aa)
hypothetical protein Tax=Pseudanabaena sp. PCC 6802 RepID=UPI0003451C54
Tax=RIFCSPLOWO2_02_FULL_Gallionellales_57_47_curated
PLM4_32_coex_redo_sep16_scaffold_160_8
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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8207..9397
DNA (1191bp) protein (397aa)
Glycosyl transferase, family 4 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I6B4_DESAP
glycosyl transferase family protein
Glycosyl transferase, family 4 {ECO:0000313|EMBL:ACA60581.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
PLM4_32_coex_redo_sep16_scaffold_160_9
unknown

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9397..10668
DNA (1272bp) protein (424aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_160_10
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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10655..11794
DNA (1140bp) protein (380aa)
Polysaccharide biosynthesis/export protein Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DTY0_THIND
Capsule polysaccharide export protein
Tax=RBG_13_OP8X_37_8_curated
PLM4_32_coex_redo_sep16_scaffold_160_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

11802..13934
DNA (2133bp) protein (711aa)
Capsular exopolysaccharide family protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MLJ2_CORCM
wzc2; capsular exopolysaccharide family protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_32_coex_redo_sep16_scaffold_160_12
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(13931..15124)
DNA (1194bp) protein (398aa)
glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase {ECO:0000313|EMBL:CAN97490.1}; EC=2.4.-.- {ECO:0000313|EMBL:CAN97490.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Glycosyltransferase Tax=Sorangium cellulosum (strain So ce56) RepID=A9EXW4_SORC5
PLM4_32_coex_redo_sep16_scaffold_160_13
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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15250..16833
DNA (1584bp) protein (528aa)
Putative dehydrogenase Tax=Frankia sp. QA3 RepID=I9A1P4_9ACTO
Putative dehydrogenase {ECO:0000313|EMBL:EIV93316.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
oxidoreductase-like protein
PLM4_32_coex_redo_sep16_scaffold_160_14
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16787..17812)
DNA (1026bp) protein (342aa)
Uncharacterized protein Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HUB0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB16707.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
PLM4_32_coex_redo_sep16_scaffold_160_15
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(17833..18849)
DNA (1017bp) protein (339aa)
glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase Tax=Sorangium cellulosum (strain So ce56) RepID=A9FCX3_SORC5
Tax=RBG_16_Chloroflexi_68_14_curated
PLM4_32_coex_redo_sep16_scaffold_160_16
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18898..19566
DNA (669bp) protein (223aa)
Uncharacterized protein bin=GWC2_Deltaproteobacteria_56_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWB2_Deltaproteobacteria_55_19_curated
PLM4_32_coex_redo_sep16_scaffold_160_17
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19563..20714
DNA (1152bp) protein (384aa)
Lipid-A-disaccharide synthase {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200}; EC=2.4.1.182 {ECO:0000256|HAMAP-Rule:MF_00392, ECO:0000256|SAAS:SAAS00093200};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
Lipid-A-disaccharide synthase Tax=Geobacter sulfurreducens RepID=LPXB_GEOSL
lpxB; lipid-A-disaccharide synthase
PLM4_32_coex_redo_sep16_scaffold_160_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

20752..21639
DNA (888bp) protein (296aa)
Uncharacterized protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UHP8_ANASK
TIGR00255 family protein {ECO:0000313|EMBL:CDM66227.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_160_19
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

21632..22267
DNA (636bp) protein (212aa)
Guanylate kinase Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z946_9BRAD
guanylate kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_32_coex_redo_sep16_scaffold_160_20
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

22284..22502
DNA (219bp) protein (73aa)
DNA-directed RNA polymerase subunit omega Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JNJ8_9GAMM
DNA-directed RNA polymerase subunit omega
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_32_coex_redo_sep16_scaffold_160_21
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22507..23685
DNA (1179bp) protein (393aa)
Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:ABK16167.1}; EC=4.1.1.36 {ECO:0000313|EMBL:ABK16167.1};; EC=6.3.2.5 {ECO:0000313|EMBL:ABK16167.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
Phosphopantothenate-cysteine ligase / Phosphopantothenoylcysteine decarboxylase Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LFG5_SYNFM
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase
PLM4_32_coex_redo_sep16_scaffold_160_22
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

23682..24362
DNA (681bp) protein (227aa)
Uracil-DNA glycosylase Tax=uncultured myxobacterium HF0200_01L06 RepID=E7C3H7_9DELT
phage SPO1 DNA polymerase-like protein
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_32_coex_redo_sep16_scaffold_160_23
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

24359..26389
DNA (2031bp) protein (677aa)
Replication restart DNA helicase PriA Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B75_SOLUE
replication restart DNA helicase PriA
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
PLM4_32_coex_redo_sep16_scaffold_160_24
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

26401..27804
DNA (1404bp) protein (468aa)
hypothetical protein; K13832 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] bin=CNBR_ACIDO species=Schlesneria paludicola genus=Schlesneria taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
3-dehydroquinate dehydratase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_coex_redo_sep16_scaffold_160_25
unknown

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27834..28442
DNA (609bp) protein (203aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_160_26
R_Proteobacteria_53_8, Proteobacteria, Bacteria

Not on your lists

28448..29080
DNA (633bp) protein (211aa)
phosphoribosylanthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase bin=GWB2_Proteobacteria_55_19 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Proteobacteria_53_8_curated
PLM4_32_coex_redo_sep16_scaffold_160_27
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(29087..30319)
DNA (1233bp) protein (411aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_coex_redo_sep16_scaffold_160_28
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(30342..31271)
DNA (930bp) protein (310aa)
Peptide ABC transporter, permease protein, putative Tax=Pelodictyon luteolum (strain DSM 273) RepID=Q3B379_PELLD
peptide ABC transporter permease
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_32_coex_redo_sep16_scaffold_160_29
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(31268..32227)
DNA (960bp) protein (320aa)
Peptide ABC transporter, permease protein Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3APQ8_CHLCH
peptide ABC transporter permease
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_32_coex_redo_sep16_scaffold_160_30
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(32260..33144)
DNA (885bp) protein (295aa)
ABC-type transporter, periplasmic subunit Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7U9R3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KDA53655.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
peptide-binding protein
Displaying 30 items

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