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PLM4_32_coex_redo_sep16_scaffold_254

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_254_1
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(3..1907)
DNA (1905bp) protein (635aa)
BNR/Asp-box repeat Tax=Chthonomonas calidirosea T49 RepID=S0EVP8_9BACT
Glycosyl hydrolase, BNR repeat precursor
Glycosyl hydrolase, BNR repeat {ECO:0000313|EMBL:AIE84715.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
PLM4_32_coex_redo_sep16_scaffold_254_2
unknown

Not on your lists

1972..2994
DNA (1023bp) protein (341aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_254_3
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2946..4190)
DNA (1245bp) protein (415aa)
NAD(FAD)-utilizing dehydrogenase Tax=Blastopirellula marina DSM 3645 RepID=A3ZUI3_9PLAN
NAD(FAD)-utilizing dehydrogenase {ECO:0000313|EMBL:EAQ79893.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_254_4
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4187..5608)
DNA (1422bp) protein (474aa)
Cation diffusion facilitator family transporter Tax=Koribacter versatilis (strain Ellin345) PF4_KORVE">RepID=Q1IPF4_KORVE
cation diffusion facilitator family transporter
Tax=GWA2_Desulfovibrionales_65_9_curated
PLM4_32_coex_redo_sep16_scaffold_254_5
RLO_PLX_64_10, Bacteria

Not on your lists

5678..7087
DNA (1410bp) protein (470aa)
excinuclease ABC subunit C Tax=Micrococcus luteus RepID=UPI000302C7F7
uvrC; excinuclease ABC subunit C
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_32_coex_redo_sep16_scaffold_254_6
RLO_PLX_64_10, Bacteria

Not on your lists

7084..8364
DNA (1281bp) protein (427aa)
Uncharacterized protein Tax=Desulfitobacterium hafniense DP7 RepID=G9XP37_DESHA
CBS domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_32_coex_redo_sep16_scaffold_254_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

8446..8910
DNA (465bp) protein (155aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035D7FD1
ferric uptake regulator family protein
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ABJ82847.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_32_coex_redo_sep16_scaffold_254_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8989..10386
DNA (1398bp) protein (466aa)
Putative uncharacterized protein bin=GWC2_Ignavibacteria_56_12 species=Methylomonas methanica genus=Methylomonas taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM4_32_coex_redo_sep16_scaffold_254_9
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

10395..10958
DNA (564bp) protein (188aa)
FMN-binding domain protein bin=GWA2_Elusimicrobia_66_18 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
FMN-binding domain-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
PLM4_32_coex_redo_sep16_scaffold_254_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10955..11422
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Bacteriovorax sp. BAL6_X RepID=T0CGI5_9DELT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_coex_redo_sep16_scaffold_254_11
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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11424..13169
DNA (1746bp) protein (582aa)
Cyclic nucleotide-binding protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M743_GEODF
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIE44241.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
cyclic nucleotide-binding protein
PLM4_32_coex_redo_sep16_scaffold_254_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13166..14947
DNA (1782bp) protein (594aa)
ABC transporter, ATP-binding/membrane protein Tax=Geobacter metallireducens RepID=Q39Q46_GEOMG
ABC transporter ATP-binding protein/membrane protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_coex_redo_sep16_scaffold_254_13
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

15029..17149
DNA (2121bp) protein (707aa)
Tax=RBG_13_RIF03_48_7_curated
PLM4_32_coex_redo_sep16_scaffold_254_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

17153..20176
DNA (3024bp) protein (1008aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITL1_KORVE
ferrienterochelin and colicins outer membrane receptor
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_coex_redo_sep16_scaffold_254_15
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(20173..22989)
DNA (2817bp) protein (939aa)
OmpA-like protein Tax=Alteromonas macleodii (strain English Channel 673) RepID=K0CJS1_ALTME
OmpA-like protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_32_coex_redo_sep16_scaffold_254_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(23024..24712)
DNA (1689bp) protein (563aa)
Uncharacterized protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0ICU1_PHYMF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_coex_redo_sep16_scaffold_254_17
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24743..25555
DNA (813bp) protein (271aa)
Uncharacterized protein Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RBI8_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG76448.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
PLM4_32_coex_redo_sep16_scaffold_254_18
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25552..25929
DNA (378bp) protein (126aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] bin=bin1_lowGC species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin1_lowGC organism_group=Unknown_CP
NADH-ubiquinone/plastoquinone oxidoreductase subunit 3
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_coex_redo_sep16_scaffold_254_19
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

25917..26450
DNA (534bp) protein (178aa)
nuoB; NADH-quinone oxidoreductase chain B (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit B bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
Tax=CSP1_2_Dadabacteria
PLM4_32_coex_redo_sep16_scaffold_254_20
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

26437..26874
DNA (438bp) protein (146aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
NADH dehydrogenase subunit C (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit C bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
PLM4_32_coex_redo_sep16_scaffold_254_21
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

26871..27329
DNA (459bp) protein (153aa)
nuoD; NADH-quinone oxidoreductase subunit D (NADH dehydrogenase I, chain D) (NDH-1, chain D) (EC:1.6.99.5 1.6.5.3) bin=bin1_lowGC species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin1_lowGC organism_group=Unknown_CP
NADH dehydrogenase subunit d (EC:1.6.5.3 1.6.99.3 1.6.99.5)
Tax=CSP1_2_Dadabacteria
Displaying 21 items

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