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PLM4_32_coex_redo_sep16_scaffold_279

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_279_1
unknown

Not on your lists

comp(86..376)
DNA (291bp) protein (97aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_279_2
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(384..2426)
DNA (2043bp) protein (681aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003790EBD
bkdA; 2-oxoisovalerate dehydrogenase E1 component
2-oxoisovalerate dehydrogenase E1 component {ECO:0000313|EMBL:AFH49358.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
PLM4_32_coex_redo_sep16_scaffold_279_3
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2526..3467
DNA (942bp) protein (314aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase Tax=Plesiocystis pacifica SIR-1 RepID=A6GH91_9DELT
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM4_32_coex_redo_sep16_scaffold_279_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

3470..5317
DNA (1848bp) protein (616aa)
Glycyl aminopeptidase. Metallo peptidase. MEROPS family M61 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021H3_SOLUE
glycyl aminopeptidase
Glycyl aminopeptidase. Metallo peptidase. MEROPS family M61 {ECO:0000313|EMBL:ABJ84416.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_32_coex_redo_sep16_scaffold_279_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5318..7042
DNA (1725bp) protein (575aa)
GTPase HflX Tax=uncultured Acidobacteria bacterium RepID=H5S9D5_9BACT
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
GTP-binding protein HflX
PLM4_32_coex_redo_sep16_scaffold_279_6
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

7115..8611
DNA (1497bp) protein (499aa)
DNA-binding HTH domain-and aminotransferase domain-containing transcriptional regulator Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIX6_CHLTF
DNA-binding HTH domain- and aminotransferase domain-containing transcriptional regulator
DNA-binding HTH domain-and aminotransferase domain-containing transcriptional regulator {ECO:0000313|EMBL:AEP12744.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_32_coex_redo_sep16_scaffold_279_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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8635..9525
DNA (891bp) protein (297aa)
Pyridoxal biosynthesis lyase PdxS bin=GWC2_Methylomirabilis_70_16 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
pyridoxal biosynthesis protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM4_32_coex_redo_sep16_scaffold_279_8
'Deinococcus soli' Cha et al. 2014, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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9519..10118
DNA (600bp) protein (200aa)
Glutamine amidotransferase subunit PdxT Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJG1_9BACT
Glutamine amidotransferase {ECO:0000313|EMBL:AKH18096.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="'Deinococcus soli' Cha et al. 2014.;"
pyridoxal phosphate synthase yaaE subunit
PLM4_32_coex_redo_sep16_scaffold_279_9
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10115..11008
DNA (894bp) protein (298aa)
branched-chain amino acid aminotransferase (EC:2.6.1.21)
Branched-chain amino acid aminotransferase Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XHR8_CALS8
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM4_32_coex_redo_sep16_scaffold_279_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11005..11817)
DNA (813bp) protein (271aa)
Putative uncharacterized protein ypfJ Tax=Candidatus Nitrospira defluvii RepID=B3U4M0_9BACT
ypfJ; hypothetical protein
Putative uncharacterized protein ypfJ {ECO:0000313|EMBL:ACE75587.1}; Uncharacterized protein {ECO:0000313|EMBL:CBK41180.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM4_32_coex_redo_sep16_scaffold_279_11
unknown

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comp(11911..13293)
DNA (1383bp) protein (461aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_279_12
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(13295..13786)
DNA (492bp) protein (164aa)
Fimbrial protein (Pilin) (Strain P1) Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CMU2_SIDLE
Uncharacterized protein {ECO:0000313|EMBL:KDA54147.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
fimbrial protein precursor (pilin) (strain P1)
PLM4_32_coex_redo_sep16_scaffold_279_13
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13906..14238
DNA (333bp) protein (111aa)
Transcriptional regulator, ArsR family Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EM43_BRASB
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABQ37237.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
PLM4_32_coex_redo_sep16_scaffold_279_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

14225..14692
DNA (468bp) protein (156aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037336DB
activator of Hsp90 ATPase 1 family protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_32_coex_redo_sep16_scaffold_279_15

Not on your lists

14689..15273
DNA (585bp) protein (195aa)
Activator of Hsp90 ATPase 1 (Fragment) Tax=uncultured microorganism RepID=K0J366_9ZZZZ
Activator of Hsp90 ATPase 1 {ECO:0000313|EMBL:BAM62519.1}; Flags: Fragment;; species="unclassified sequences; environmental samples.;" source="uncultured microorganism.;"
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_279_16
RLO_PLX_64_10, Bacteria

Not on your lists

15270..15698
DNA (429bp) protein (143aa)
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_32_coex_redo_sep16_scaffold_279_17
unknown

Not on your lists

comp(15695..16249)
DNA (555bp) protein (185aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_279_18
unknown

Not on your lists

comp(16252..16755)
DNA (504bp) protein (168aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_279_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(16752..17261)
DNA (510bp) protein (170aa)
Putative ECF-subfamily sigma factor Tax=Salinibacter ruber (strain M8) RepID=D5H9Y0_SALRM
ECF-subfamily sigma factor
Putative ECF-subfamily sigma factor {ECO:0000313|EMBL:CBH24835.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (strain M8).;"
PLM4_32_coex_redo_sep16_scaffold_279_20
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

17325..18590
DNA (1266bp) protein (422aa)
Major facilitator superfamily MFS_1 Tax=Chloroflexus RepID=A9WAF7_CHLAA bin=16ft_combo_ws3_JS1 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
major facilitator superfamily protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM4_32_coex_redo_sep16_scaffold_279_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18587..18979
DNA (393bp) protein (131aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=uncultured bacterium BLR8 RepID=C0IN70_9BACT
Glyoxalase-like domain protein
Glyoxalase-like domain protein {ECO:0000313|EMBL:AHG92524.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_coex_redo_sep16_scaffold_279_22
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(18976..19773)
DNA (798bp) protein (266aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase I, putative bin=GWF2_Lentisphaerae_52_8 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=CG_Arma_01
PLM4_32_coex_redo_sep16_scaffold_279_23
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(19766..22717)
DNA (2952bp) protein (984aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 2 bin=GWF2_Lentisphaerae_57_35 species=Methanocella conradii genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=CG_Arma_01
PLM4_32_coex_redo_sep16_scaffold_279_24
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

22755..23732
DNA (978bp) protein (326aa)
Putative HTH-type transcriptional regulator YybE Tax=Arthrobacter sp. Rue61a RepID=J7LM23_9MICC
yybE; HTH-type transcriptional regulator YybE
Tax=RBG_16_Chloroflexi_68_14_curated
PLM4_32_coex_redo_sep16_scaffold_279_25
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(23973..24422)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SZ50_PLAL2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG69951.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
PLM4_32_coex_redo_sep16_scaffold_279_26
unknown

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comp(24433..25038)
DNA (606bp) protein (202aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_279_27
unknown

Not on your lists

comp(25048..26550)
DNA (1503bp) protein (501aa)

This feature has no annotations

Displaying 27 items

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