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PLM4_32_coex_redo_sep16_scaffold_329

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_329_1
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3..461
DNA (459bp) protein (153aa)
Putative isocitrate dehydrogenase, NAD-dependent Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CFP3_MYXFH
putative isocitrate dehydrogenase, NAD-dependent
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM4_32_coex_redo_sep16_scaffold_329_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

503..2917
DNA (2415bp) protein (805aa)
Multi-sensor hybrid histidine kinase Tax=Chthoniobacter flavus Ellin428 RepID=B4D2K7_9BACT
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EDY19447.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
putative PAS/PAC sensor protein
PLM4_32_coex_redo_sep16_scaffold_329_3
unknown

Not on your lists

comp(2914..3177)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_329_4
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3177..4640)
DNA (1464bp) protein (488aa)
Hypothetical cytosolic protein Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LUM7_SYNAS
cytoplasmic protein
Tax=CG_Desulfarul_01
PLM4_32_coex_redo_sep16_scaffold_329_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4652..5251)
DNA (600bp) protein (200aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_coex_redo_sep16_scaffold_329_6
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5296..6090)
DNA (795bp) protein (265aa)
Putative uncharacterized protein Tax=Azospirillum amazonense Y2 RepID=G1Y434_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDI01778.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_329_7
Mycobacterium sp. KMS, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6115..7365)
DNA (1251bp) protein (417aa)
Putative transmembrane protein Tax=Mycobacterium sp. (strain JLS) RepID=A3PXG0_MYCSJ
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:ABL91066.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain KMS).;"
PLM4_32_coex_redo_sep16_scaffold_329_8
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7394..10036
DNA (2643bp) protein (881aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IP25_9PLAN
ATP-dependent nuclease subunit B-like protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM4_32_coex_redo_sep16_scaffold_329_9
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

10033..13221
DNA (3189bp) protein (1063aa)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
PLM4_32_coex_redo_sep16_scaffold_329_10
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13218..13766
DNA (549bp) protein (183aa)
RNA polymerase sigma-70 factor Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FSQ2_STIAD
RNA polymerase, sigma-24 subunit, ECF subfamily
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
PLM4_32_coex_redo_sep16_scaffold_329_11
unknown

Not on your lists

13763..14209
DNA (447bp) protein (149aa)
Putative uncharacterized protein Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B7H2_DESCC
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_329_12
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14206..14742
DNA (537bp) protein (179aa)
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
PLM4_32_coex_redo_sep16_scaffold_329_13
Leptospirillum ferriphilum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(14726..15481)
DNA (756bp) protein (252aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferriphilum (strain ML-04).;"
Putative 3-methyladenine DNA glycosylase Tax=Leptospirillum ferriphilum (strain ML-04) RepID=J9ZBV5_LEPFM
PLM4_32_coex_redo_sep16_scaffold_329_14
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

15725..16285
DNA (561bp) protein (187aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA53521.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
id=3720805 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
PLM4_32_coex_redo_sep16_scaffold_329_15
BJP_IG2069_Chloroflexi_70_12, Chloroflexi, Bacteria

Not on your lists

16285..18471
DNA (2187bp) protein (729aa)
oxidoreductase subunit alpha (EC:1.2.1.2)
Oxidoreductase alpha (Molybdopterin) subunit Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QZ85_PIRSD
Tax=BJP_IG2069_Chloroflexi_70_12
PLM4_32_coex_redo_sep16_scaffold_329_16
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18468..19127
DNA (660bp) protein (220aa)
Phosphoserine phosphatase Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JEE0_THEKO
phosphoserine phosphatase
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM4_32_coex_redo_sep16_scaffold_329_17
unknown

Not on your lists

19371..19784
DNA (414bp) protein (138aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_329_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19729..20235)
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4L540_9GAMM
NUDIX hydrolase
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_coex_redo_sep16_scaffold_329_19
GWA2_Gallionellales_60_18_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20274..21422
DNA (1149bp) protein (383aa)
Aminotransferase, class V Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LM34_SYNFM
class V aminotransferase
Tax=GWA2_Gallionellales_60_18_curated
PLM4_32_coex_redo_sep16_scaffold_329_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21419..22978
DNA (1560bp) protein (520aa)
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
Exodeoxyribonuclease 7 large subunit Tax=Sorangium cellulosum (strain So ce56) RepID=A9FXY4_SORC5
PLM4_32_coex_redo_sep16_scaffold_329_21

Not on your lists

22975..23256
DNA (282bp) protein (94aa)
xseB; exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease VII small subunit Tax=Sorangium cellulosum (strain So ce56) RepID=A9FXY7_SORC5
Marine sediment metagenome DNA, contig: S01H1_S11642 {ECO:0000313|EMBL:GAG00714.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_32_coex_redo_sep16_scaffold_329_22
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

23256..24335
DNA (1080bp) protein (360aa)
tRNA-dihydrouridine synthase Tax=uncultured Acidobacteria bacterium RepID=Q7X346_9BACT
nifR3; TIM barrel oxidoreductase NifR3
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_coex_redo_sep16_scaffold_329_23
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

24346..24954
DNA (609bp) protein (203aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Myxococcus stipitatus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_coex_redo_sep16_scaffold_329_24
unknown

Not on your lists

24985..25206
DNA (222bp) protein (74aa)

This feature has no annotations

Displaying 24 items

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