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PLM4_32_coex_redo_sep16_scaffold_371

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_371_1
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(1..138)
DNA (138bp) protein (46aa)
hypothetical protein Tax=Meiothermus timidus RepID=UPI000372FC3B
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEB11489.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
PLM4_32_coex_redo_sep16_scaffold_371_2
unknown

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218..922
DNA (705bp) protein (235aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_371_3
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(926..2104)
DNA (1179bp) protein (393aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA54813.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
von Willebrand factor A
von Willebrand factor A bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
PLM4_32_coex_redo_sep16_scaffold_371_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2101..3600)
DNA (1500bp) protein (500aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI0003689BBA
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
PLM4_32_coex_redo_sep16_scaffold_371_5
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3600..4925)
DNA (1326bp) protein (442aa)
Uncharacterized protein Tax=Methyloglobulus morosus KoM1 RepID=V5BJ84_9GAMM
NAD(P)-dependent oxidoreductase {ECO:0000313|EMBL:AJY68205.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_371_6
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4935..5498)
DNA (564bp) protein (188aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase RmlC Tax=Methyloglobulus morosus KoM1 RepID=V5BNP6_9GAMM
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AJY68206.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens.;"
PLM4_32_coex_redo_sep16_scaffold_371_7
RBG_19FT_COMBO_Deltaproteobacteria_46_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5532..6260)
DNA (729bp) protein (243aa)
ABC transporter Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00038137FE
ABC transporter-like protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_9_curated
PLM4_32_coex_redo_sep16_scaffold_371_8
RBG_19FT_COMBO_Deltaproteobacteria_46_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6268..7521)
DNA (1254bp) protein (418aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria_55_11 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_9_curated
PLM4_32_coex_redo_sep16_scaffold_371_9
RBG_19FT_COMBO_Deltaproteobacteria_46_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7531..8760)
DNA (1230bp) protein (410aa)
hypothetical protein; K02004 putative ABC transport system permease protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_9_curated
PLM4_32_coex_redo_sep16_scaffold_371_10
RBG_19FT_COMBO_Deltaproteobacteria_46_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8760..9872)
DNA (1113bp) protein (371aa)
RND family efflux transporter MFP subunit; K02005 HlyD family secretion protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
RND family efflux transporter MFP subunit
Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_9_curated
PLM4_32_coex_redo_sep16_scaffold_371_11
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

10025..11242
DNA (1218bp) protein (406aa)
hypothetical protein Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B4B650
multidrug resistance efflux pump-like protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_32_coex_redo_sep16_scaffold_371_12
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

11239..12462
DNA (1224bp) protein (408aa)
Membrane-fusion protein, putative Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CPP4_SHEPW
membrane-fusion protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_32_coex_redo_sep16_scaffold_371_13
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12459..13736
DNA (1278bp) protein (426aa)
Uncharacterized protein Tax=Shewanella benthica KT99 RepID=A9DK54_9GAMM
Macrolide-specific efflux protein macA {ECO:0000313|EMBL:KIG17925.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
membrane-fusion protein
PLM4_32_coex_redo_sep16_scaffold_371_14
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

13733..14965
DNA (1233bp) protein (411aa)
ABC transporter, permease protein, putative Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZLU1_SHEVD
ABC transporter permease
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_32_coex_redo_sep16_scaffold_371_15
unknown

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comp(14977..16188)
DNA (1212bp) protein (404aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_371_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(16210..17553)
DNA (1344bp) protein (448aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
phosphoglucosamine mutase Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000376793B
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_coex_redo_sep16_scaffold_371_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(17550..18485)
DNA (936bp) protein (312aa)
YbbR-like Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JY24_DESAC
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_coex_redo_sep16_scaffold_371_18
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(18478..19317)
DNA (840bp) protein (280aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027B4_SOLUE
hypothetical protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_32_coex_redo_sep16_scaffold_371_19
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19354..20541)
DNA (1188bp) protein (396aa)
folP; dihydropteroate synthase (DHPS) (Dihydropteroate pyrophosphorylase) (EC:2.5.1.15) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
folP; dihydropteroate synthase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM4_32_coex_redo_sep16_scaffold_371_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(20542..22482)
DNA (1941bp) protein (647aa)
ATP-dependent zinc metalloprotease FtsH Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVN1_KORVE
FtsH peptidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_coex_redo_sep16_scaffold_371_21
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22545..23063)
DNA (519bp) protein (173aa)
hpt; hypoxanthine-guanine phosphoribosyltransferase Hpt (EC:2.4.2.8)
Hypoxanthine-guanine phosphoribosyltransferase Hpt Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LGG5_THEPS
Tax=S_Thermacetogenium_phaeum_55_64
PLM4_32_coex_redo_sep16_scaffold_371_22
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

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comp(23069..23863)
DNA (795bp) protein (265aa)
ATPase; tRNA(Ile)-lysidine synthase (EC:6.3.4.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
tRNA(Ile) lysidine-34 synthase
Tax=RBG_13_Aminicenantes_63_10_curated
PLM4_32_coex_redo_sep16_scaffold_371_23
unknown

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comp(23864..24232)
DNA (369bp) protein (123aa)

This feature has no annotations

Displaying 23 items

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