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PLM4_32_coex_redo_sep16_scaffold_479

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_479_1
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1305)
DNA (1305bp) protein (435aa)
Gluconolactonase Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W8B1_DESOD
gluconolactonase
Gluconolactonase {ECO:0000313|EMBL:AET67051.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
PLM4_32_coex_redo_sep16_scaffold_479_2
CG_Elusi_04, Elusimicrobia, Bacteria

Not on your lists

comp(1302..3209)
DNA (1908bp) protein (636aa)
Serine/threonine protein kinase with Chase2 sensor bin=GWA2_Elusimicrobia_69_24 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
serine/threonine protein kinase
Tax=CG_Elusi_04
PLM4_32_coex_redo_sep16_scaffold_479_3
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3290..4333)
DNA (1044bp) protein (348aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase Tax=Rhodanobacter denitrificans RepID=M4NBH9_9GAMM
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM4_32_coex_redo_sep16_scaffold_479_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4390..4977)
DNA (588bp) protein (196aa)
ATP synthase subunit b
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ATP synthase subunit b bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
PLM4_32_coex_redo_sep16_scaffold_479_5
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4986..5222)
DNA (237bp) protein (79aa)
ATP synthase F0, C subunit Tax=Anaeromyxobacter RepID=B4UJU6_ANASK
ATP synthase F0 subunit C
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
PLM4_32_coex_redo_sep16_scaffold_479_6
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(5242..6087)
DNA (846bp) protein (282aa)
ATP synthase subunit a bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
F0F1 ATP synthase subunit A
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM4_32_coex_redo_sep16_scaffold_479_7
unknown

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comp(6084..6452)
DNA (369bp) protein (123aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_479_8
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(6680..8266)
DNA (1587bp) protein (529aa)
nuoM; NADH-quinone oxidoreductase subunit M (NADH dehydrogenase I, chain M) (NDH-1, chain M) (EC:1.6.5.3 1.6.99.5) bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_32_coex_redo_sep16_scaffold_479_9
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8308..8937)
DNA (630bp) protein (210aa)
Lytic transglycosylase, catalytic Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RHF2_MOOTA
lytic transglycosylase, catalytic
Tax=RBG_13_Deltaproteobacteria_47_9_curated
PLM4_32_coex_redo_sep16_scaffold_479_10
unknown

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comp(9005..10318)
DNA (1314bp) protein (438aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_479_11
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

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comp(10315..10746)
DNA (432bp) protein (144aa)
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
PLM4_32_coex_redo_sep16_scaffold_479_12
unknown

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comp(10758..11318)
DNA (561bp) protein (187aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_479_13
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11583..12737
DNA (1155bp) protein (385aa)
Uncharacterized protein {ECO:0000313|EMBL:KGB80625.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI22.;"
PLM4_32_coex_redo_sep16_scaffold_479_14
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

12745..13935
DNA (1191bp) protein (397aa)
phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] bin=bin3_NC10 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM4_32_coex_redo_sep16_scaffold_479_15
Desulfococcus oleovorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13932..14684
DNA (753bp) protein (251aa)
Triose-phosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus oleovorans (strain DSM 6200 / Hxd3).;"
Triosephosphate isomerase Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZTP5_DESOH
PLM4_32_coex_redo_sep16_scaffold_479_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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14716..15078
DNA (363bp) protein (121aa)
Protein translocase subunit secG Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RN5_SOLUE
protein translocase subunit SecG
Protein translocase subunit secG {ECO:0000313|EMBL:ABJ87685.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_32_coex_redo_sep16_scaffold_479_trna_1
unknown

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15087..15170
DNA (84bp)
transferRNA Leu
PLM4_32_coex_redo_sep16_scaffold_479_17
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(15231..15695)
DNA (465bp) protein (155aa)
General secretion pathway protein G Tax=mine drainage metagenome RepID=E6QIQ3_9ZZZZ
General secretion pathway protein GspG {ECO:0000313|EMBL:KDA54509.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
secretion protein
PLM4_32_coex_redo_sep16_scaffold_479_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15806..17785
DNA (1980bp) protein (660aa)
acs; acetyl-coenzyme A synthetase (EC:6.2.1.1); K01895 acetyl-CoA synthetase [EC:6.2.1.1] bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Acetyl-coenzyme A synthetase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_32_coex_redo_sep16_scaffold_479_19
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(17782..20076)
DNA (2295bp) protein (765aa)
putative penicillin-binding protein 1B (EC:2.4.1.129 3.4.-.-)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YBB8_9DELT
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_32_coex_redo_sep16_scaffold_479_20
Dolosigranulum pigrum, Dolosigranulum, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20198..20491)
DNA (294bp) protein (98aa)
DNA-binding protein HU Tax=Dolosigranulum pigrum ATCC 51524 RepID=H3NE00_9LACT
DNA-binding protein HU {ECO:0000313|EMBL:EHR33727.1}; species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Dolosigranulum.;" source="Dolosigranulum pigrum ATCC 51524.;"
histone family protein DNA-binding protein
PLM4_32_coex_redo_sep16_scaffold_479_21
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20511..20909)
DNA (399bp) protein (133aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
PLM4_32_coex_redo_sep16_scaffold_479_22
unknown

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21037..21459
DNA (423bp) protein (141aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_479_23
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21456..21929)
DNA (474bp) protein (158aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
7-cyano-7-deazaguanine synthase Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G0Y8_9GAMM
predicted PP-loop superfamily ATPase
Displaying 24 items

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