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PLM4_32_coex_redo_sep16_scaffold_530

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_530_1
unknown

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comp(2..271)
DNA (270bp) protein (90aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_530_2
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

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comp(287..811)
DNA (525bp) protein (175aa)
Cytochrome c family protein bin=GWD2_Nitrospirae-related_57_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
cytochrome c family protein
Tax=GWC2_Nitrospirae_57_13_curated
PLM4_32_coex_redo_sep16_scaffold_530_3
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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comp(820..1986)
DNA (1167bp) protein (389aa)
NHL repeat containing protein bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
NHL repeat-containing protein
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_32_coex_redo_sep16_scaffold_530_4
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

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comp(2088..2891)
DNA (804bp) protein (268aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
Tax=GWC2_Nitrospirae_56_14_curated
PLM4_32_coex_redo_sep16_scaffold_530_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2911..6306)
DNA (3396bp) protein (1132aa)
PKD domain containing protein bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Glycoside hydrolase family protein {ECO:0000313|EMBL:ESP86882.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrrellensis G22.;"
PLM4_32_coex_redo_sep16_scaffold_530_6
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

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6780..7115
DNA (336bp) protein (112aa)
Putative uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=Leptolyngbya sp. PCC 7375 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=CG_Anaero_02
PLM4_32_coex_redo_sep16_scaffold_530_7
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

7324..8277
DNA (954bp) protein (318aa)
hypothetical protein bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
universal stress protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_32_coex_redo_sep16_scaffold_530_8
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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8274..8717
DNA (444bp) protein (148aa)
Heat shock protein, Hsp20 family Tax=Candidatus Nitrospira defluvii RepID=D8PFX6_9BACT
heat shock protein, hsp20 family
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM4_32_coex_redo_sep16_scaffold_530_9
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9037..9567)
DNA (531bp) protein (177aa)
CBS protein Tax=uncultured bacterium RepID=K1YFJ3_9BACT
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM4_32_coex_redo_sep16_scaffold_530_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9636..10304)
DNA (669bp) protein (223aa)
Transport-associated protein Tax=Anabaena variabilis (strain ATCC 29413 / PCC 7937) RepID=Q3M1B6_ANAVT
transport-associated protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_coex_redo_sep16_scaffold_530_11
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10648..11490)
DNA (843bp) protein (281aa)
Tetratricopeptide TPR_2 repeat protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8V0_ANADF
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABS25146.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_32_coex_redo_sep16_scaffold_530_12
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11495..12394)
DNA (900bp) protein (300aa)
Probable DNA repair protein Anae109_0938 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8V1_ANADF
Ku family containing protein
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM4_32_coex_redo_sep16_scaffold_530_13
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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12430..14946
DNA (2517bp) protein (839aa)
DNA ligase D Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8V2_ANADF
DNA ligase D
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_32_coex_redo_sep16_scaffold_530_14

Not on your lists

14983..15510
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K7PFJ6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AFK83593.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM4_32_coex_redo_sep16_scaffold_530_15
unknown

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15710..16021
DNA (312bp) protein (104aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_530_16
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

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16256..17737
DNA (1482bp) protein (494aa)
Putative uncharacterized protein Tax=Aureococcus anophagefferens RepID=F0YNC4_AURAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGB02851.1}; Flags: Fragment;; species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anophagefferens (Harmful bloom alga).;"
fibronectin type III domain-containing protein
PLM4_32_coex_redo_sep16_scaffold_530_17
Geminocystis sp. NIES-3709, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18007..18954)
DNA (948bp) protein (316aa)
hypothetical protein, partial Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000376821A
FG-GAP repeat-containing protein
Alkaline phosphatase {ECO:0000313|EMBL:BAQ64645.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3709.;"
PLM4_32_coex_redo_sep16_scaffold_530_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

19104..21416
DNA (2313bp) protein (771aa)
endothelin-converting protein 1 (EC:3.4.24.71)
Endothelin-converting enzyme 1 {ECO:0000313|EMBL:ABJ82808.1}; EC=3.4.24.71 {ECO:0000313|EMBL:ABJ82808.1};; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036F83A2
Displaying 18 items

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