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PLM4_32_coex_redo_sep16_scaffold_599

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_599_1
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(1..933)
DNA (933bp) protein (311aa)
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus filiformis.;"
phosphoenolpyruvate carboxykinase Tax=Thermus igniterrae RepID=UPI00036A0F59
PLM4_32_coex_redo_sep16_scaffold_599_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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1034..2146
DNA (1113bp) protein (371aa)
Ribonuclease D, putative Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A7R1_PELCD
ribonuclease D
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM4_32_coex_redo_sep16_scaffold_599_3
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2174..2995
DNA (822bp) protein (274aa)
dop; serine protease (EC:3.4.21.-)
Serine protease {ECO:0000313|EMBL:CCF00805.1}; EC=3.4.21.- {ECO:0000313|EMBL:CCF00805.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
Serine protease Tax=Rhizobium fredii (strain HH103) RepID=G9AIC3_RHIFH
PLM4_32_coex_redo_sep16_scaffold_599_4
unknown

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2992..4581
DNA (1590bp) protein (530aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_599_5
unknown

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comp(4553..4933)
DNA (381bp) protein (127aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_599_6
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(4930..5661)
DNA (732bp) protein (244aa)
HAD-superfamily hydrolase, subfamily IA, variant 1, partial Tax=Gemmata obscuriglobus RepID=UPI00016C4115
Uncharacterized protein {ECO:0000313|EMBL:KDA53856.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
phosphoglycolate phosphatase
PLM4_32_coex_redo_sep16_scaffold_599_7
unknown

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comp(5654..5911)
DNA (258bp) protein (86aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_599_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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5969..7030
DNA (1062bp) protein (354aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EFH86982.1}; EC=1.2.1.11 {ECO:0000313|EMBL:EFH86982.1};; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMI2_9CHLR
PLM4_32_coex_redo_sep16_scaffold_599_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

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7036..8391
DNA (1356bp) protein (452aa)
Aspartokinase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INQ8_KORVE
aspartate kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM4_32_coex_redo_sep16_scaffold_599_10
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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8388..9086
DNA (699bp) protein (233aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase bin=GWF2_Bacteroidetes_43_11 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM4_32_coex_redo_sep16_scaffold_599_11
RHI_OD1_Kaiserbacteria_53_13, Kaiserbacteria, Parcubacteria, Bacteria

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9083..9994
DNA (912bp) protein (304aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase bin=GWC2_Proteo_65_14_Ab886 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Tax=RIFCSPHIGHO2_12_FULL_OD1_Kaiserbacteria_53_13_curated
PLM4_32_coex_redo_sep16_scaffold_599_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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9991..10827
DNA (837bp) protein (279aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:AEN73055.1}; EC=2.3.1.117 {ECO:0000313|EMBL:AEN73055.1};; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SIY0_RHOMR
PLM4_32_coex_redo_sep16_scaffold_599_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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10824..11966
DNA (1143bp) protein (381aa)
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:CDM66096.1}; EC=2.6.1.1 {ECO:0000313|EMBL:CDM66096.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Aminotransferase class I and II Tax=Aminomonas paucivorans DSM 12260 RepID=E3CZR2_9BACT
aminotransferase class I and II
PLM4_32_coex_redo_sep16_scaffold_599_14
unknown

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comp(11963..12844)
DNA (882bp) protein (294aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_599_15
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(12860..13954)
DNA (1095bp) protein (365aa)
sodium:proton antiporter Tax=Methylobacterium sp. MB200 RepID=UPI000347B7C9
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_32_coex_redo_sep16_scaffold_599_16
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

13983..14396
DNA (414bp) protein (138aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003785525
CoA-binding protein
Tax=CSP1_3_Armatimonadetes
PLM4_32_coex_redo_sep16_scaffold_599_17
unknown

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comp(14384..15643)
DNA (1260bp) protein (420aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_599_18
unknown

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comp(15696..16478)
DNA (783bp) protein (261aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_599_19
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16650..17297
DNA (648bp) protein (216aa)
phosphatidylethanolamine N-methyltransferase (EC:2.1.1.17)
Phosphatidylethanolamine N-methyltransferase protein Tax=Salinisphaera shabanensis E1L3A RepID=U2EQ42_9GAMM
Phosphatidylethanolamine N-methyltransferase {ECO:0000313|EMBL:KEZ76174.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
PLM4_32_coex_redo_sep16_scaffold_599_20
unknown

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comp(17294..18019)
DNA (726bp) protein (242aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_599_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18127..19659
DNA (1533bp) protein (511aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Lysine--tRNA ligase Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=SYK_METBF
lysyl-tRNA synthetase
PLM4_32_coex_redo_sep16_scaffold_599_22
Chlorobaculum tepidum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(19656..20138)
DNA (483bp) protein (161aa)
MFS transporter family protein Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KCS6_CHLTE
MFS transporter family protein
MFS transporter family protein {ECO:0000313|EMBL:AAM72566.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 /; TLS).;"
Displaying 22 items

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