ggKbase home page

PLM4_32_coex_redo_sep16_scaffold_753

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_753_1
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1985)
DNA (1983bp) protein (661aa)
Putative membrane associated hydrolase {ECO:0000313|EMBL:KGQ17988.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
membrane associated hydrolase bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_753_2
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2059..2823
DNA (765bp) protein (255aa)
3-oxoacyl-[acyl-carrier protein] reductase Tax=Cystobacter fuscus DSM 2262 RepID=S9PH13_9DELT
Short-chain dehydrogenase {ECO:0000313|EMBL:KFA90250.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
short chain dehydrogenase/reductase family oxidoreductase
PLM4_32_coex_redo_sep16_scaffold_753_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2820..3275
DNA (456bp) protein (152aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IV49_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG92791.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_coex_redo_sep16_scaffold_753_4
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3305..3679
DNA (375bp) protein (125aa)
IG hypothetical 16873 protein Tax=Clostridium sp. D5 RepID=F0YYR3_9CLOT
IG hypothetical 16873 protein {ECO:0000313|EMBL:EGB93365.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_753_5
unknown

Not on your lists

3670..3825
DNA (156bp) protein (52aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_753_6
unknown

Not on your lists

3822..3992
DNA (171bp) protein (57aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_753_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4000..5148
DNA (1149bp) protein (383aa)
Peptidase S9 family protein Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HTS7_RUBGI
peptidase S9 family protein
Peptidase S9 family protein {ECO:0000313|EMBL:BAL96414.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
PLM4_32_coex_redo_sep16_scaffold_753_8
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5145..5564
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Hydrogenophaga sp. PBC RepID=I4MHW9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIK88809.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_753_9
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5566..5970
DNA (405bp) protein (135aa)
hypothetical protein Tax=Arhodomonas aquaeolei RepID=UPI00037F8735
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN36408.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
PLM4_32_coex_redo_sep16_scaffold_753_10
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5967..6824)
DNA (858bp) protein (286aa)
hypothetical protein Tax=Bacillus sp. L1(2012) RepID=UPI000346EE4A
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
PLM4_32_coex_redo_sep16_scaffold_753_11
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6958..9708
DNA (2751bp) protein (917aa)
NAD(+) ADP-ribosyltransferase
NAD(+) ADP-ribosyltransferase {ECO:0000313|EMBL:BAP56732.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
Uncharacterized protein containing a von Willebrand factor type A (VWA) domain bin=GWB2_Elusimicrobia_63_16 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
PLM4_32_coex_redo_sep16_scaffold_753_12
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(9709..10638)
DNA (930bp) protein (310aa)
hypothetical protein bin=bin5_DeltaP species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_32_coex_redo_sep16_scaffold_753_13
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10639..10971)
DNA (333bp) protein (111aa)
id=14624314 bin=bin5_DeltaP tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=CSP1_8_Deltaproteobacteria
PLM4_32_coex_redo_sep16_scaffold_753_14
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(11048..14161)
DNA (3114bp) protein (1038aa)
Histidine kinase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVR7_OPITP
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACB75003.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_32_coex_redo_sep16_scaffold_753_15
unknown

Not on your lists

14349..15062
DNA (714bp) protein (238aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_753_16

Not on your lists

comp(15080..16741)
DNA (1662bp) protein (554aa)
Asparagine synthetase B (Glutamine-hydrolyzing) Tax=mine drainage metagenome RepID=T0ZIM0_9ZZZZ
Asparagine synthetase B (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EQD44297.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
asnB; asparagine synthetase B
PLM4_32_coex_redo_sep16_scaffold_753_17
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16779..17150
DNA (372bp) protein (124aa)
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM4_32_coex_redo_sep16_scaffold_753_18
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17113..18006)
DNA (894bp) protein (298aa)
hypothetical protein Tax=Xanthomonas sp. SHU308 RepID=UPI0003745DAA
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AJC46161.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas sacchari.;"
PLM4_32_coex_redo_sep16_scaffold_753_19
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(18013..18213)
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
Displaying 19 items

View Taxonomy