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PLM4_32_coex_redo_sep16_scaffold_3239

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_3239_1
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(1..1095)
DNA (1095bp) protein (365aa)
peptidase M48, Ste24p bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidase M48, Ste24p
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_32_coex_redo_sep16_scaffold_3239_2
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1260..1415
DNA (156bp) protein (52aa)
Putative uncharacterized protein bin=GWC2_Pelobacter_58_13 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
PLM4_32_coex_redo_sep16_scaffold_3239_3
unknown

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1428..1637
DNA (210bp) protein (70aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_3239_4
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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1647..2351
DNA (705bp) protein (235aa)
Transport-associated protein Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X2A9_ACISM
transporter
Transport-associated protein {ECO:0000313|EMBL:ADW68041.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
PLM4_32_coex_redo_sep16_scaffold_3239_5
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

2354..4567
DNA (2214bp) protein (738aa)
Penicillin-binding protein 1 bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
penicillin-binding protein 1
Tax=RBG_16_Actinobacteria_67_10_curated
PLM4_32_coex_redo_sep16_scaffold_3239_6
unknown

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4567..5121
DNA (555bp) protein (185aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_3239_7
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

5367..6452
DNA (1086bp) protein (362aa)
two-component hybrid sensor and regulator bin=GWF2_Lentisphaerae_57_35 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
histidine kinase
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_32_coex_redo_sep16_scaffold_3239_8
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

6449..7129
DNA (681bp) protein (227aa)
Response regulator receiver protein bin=GWF2_Lentisphaerae_52_8 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
LuxR family transcriptional regulator
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_32_coex_redo_sep16_scaffold_3239_9
Opitutaceae bacterium TAV1, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(7116..8390)
DNA (1275bp) protein (425aa)
PAS domain-containing protein,histidine kinase Tax=Opitutaceae bacterium TAV1 RepID=I6AQP4_9BACT
PAS domain-containing protein,histidine kinase {ECO:0000313|EMBL:EIP97335.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;"
histidine kinase
PLM4_32_coex_redo_sep16_scaffold_3239_10
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(8387..8737)
DNA (351bp) protein (117aa)
KaiB domain protein Tax=Opitutaceae bacterium TAV5 RepID=H1ILQ4_9BACT
thiol-disulfide isomerase
Thiol-disulfide isomerase {ECO:0000313|EMBL:AHF92589.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
PLM4_32_coex_redo_sep16_scaffold_3239_11
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(8753..9055)
DNA (303bp) protein (101aa)
KaiB domain protein Tax=Opitutaceae bacterium TAV5 RepID=H1ILQ3_9BACT
KaiB 1
KaiB 1 {ECO:0000313|EMBL:AHF92588.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
Displaying 11 items

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