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PLM4_32_coex_redo_sep16_scaffold_3384

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_3384_1
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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1..1020
DNA (1020bp) protein (340aa)
60 kDa chaperonin Tax=Koribacter versatilis (strain Ellin345) RepID=CH60_KORVE
groEL; molecular chaperone GroEL
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_32_coex_redo_sep16_scaffold_3384_2
RIFOXYD1_FULL_Bdellovibrionales_53_11_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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1109..2035
DNA (927bp) protein (309aa)
Putative transmembrane permease bin=GWB1_Deltaproteobacteria_rel_55_8 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
putative permease, DMT superfamily
Tax=RIFOXYD1_FULL_Bdellovibrionales_53_11_curated
PLM4_32_coex_redo_sep16_scaffold_3384_3
Paenibacillus sp. VKM B-2647, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2032..3189)
DNA (1158bp) protein (386aa)
amidohydrolase (EC:3.5.1.14 3.5.1.47)
Amidohydrolase Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZ44_THEOJ
Peptidase M20 {ECO:0000313|EMBL:KIL41154.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. VKM B-2647.;"
PLM4_32_coex_redo_sep16_scaffold_3384_4
RLO_PLX_64_10, Bacteria

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3220..4068
DNA (849bp) protein (283aa)
Uncharacterized protein Tax=Blastopirellula marina DSM 3645 RepID=A3ZKZ1_9PLAN
periplasmic solute-binding protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_32_coex_redo_sep16_scaffold_3384_5
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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4065..4979
DNA (915bp) protein (305aa)
Glycine cleavage T protein (Aminomethyl transferase) Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NPT7_ROSCS
glycine cleavage T protein
Glycine cleavage T protein (Aminomethyl transferase) {ECO:0000313|EMBL:ABU59583.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus castenholzii (strain DSM 13941 / HLO8).;"
PLM4_32_coex_redo_sep16_scaffold_3384_6
RLO_RIF05_58_11, RIF5, Bacteria

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comp(4969..5907)
DNA (939bp) protein (313aa)
Putative Deacetylase, histone deacetylase family Tax=Candidatus Nitrospira defluvii RepID=D8PI28_9BACT
putative deacetylase, histone deacetylase family
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM4_32_coex_redo_sep16_scaffold_3384_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(5925..6635)
DNA (711bp) protein (237aa)
Outer membrane lipoprotein carrier protein LolA Tax=uncultured prokaryote RepID=H5SKX4_9ZZZZ
outer membrane lipoprotein carrier protein LolA
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_32_coex_redo_sep16_scaffold_3384_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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6647..8860
DNA (2214bp) protein (738aa)
peptidyl-prolyl cis-trans isomerase bin=CNBR_ACIDO species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
peptidyl-prolyl cis-trans isomerase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_32_coex_redo_sep16_scaffold_3384_9
unknown

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comp(8857..8985)
DNA (129bp) protein (43aa)

This feature has no annotations

Displaying 9 items

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