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PLM4_32_coex_redo_sep16_scaffold_4122

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_4122_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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3..899
DNA (897bp) protein (299aa)
30S ribosomal protein S2 bin=GWA2_Methylomirabilis_73_35 species=Salimicrobium sp. MJ3 genus=Salimicrobium taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
30S ribosomal protein S2
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_coex_redo_sep16_scaffold_4122_2
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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983..1807
DNA (825bp) protein (275aa)
Elongation factor Ts Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=EFTS_GEOLS
tsf; elongation factor Ts
Elongation factor Ts {ECO:0000255|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000255|HAMAP-Rule:MF_00050};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
PLM4_32_coex_redo_sep16_scaffold_4122_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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1813..2538
DNA (726bp) protein (242aa)
uridylate kinase (EC:2.7.4.22)
Uridylate kinase bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM4_32_coex_redo_sep16_scaffold_4122_4
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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2542..3102
DNA (561bp) protein (187aa)
Ribosome-recycling factor Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02AL4_SOLUE
ribosome recycling factor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_32_coex_redo_sep16_scaffold_4122_5
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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3114..4286
DNA (1173bp) protein (391aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60 4.6.1.12)
Bifunctional enzyme IspD/IspF Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=ISPDF_ANADE
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM4_32_coex_redo_sep16_scaffold_4122_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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4283..5728
DNA (1446bp) protein (482aa)
gltX2; glutamate--tRNA ligase (EC:6.1.1.17)
Glutamate--tRNA ligase Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F3W8_ACIC5
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_coex_redo_sep16_scaffold_4122_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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5725..6492
DNA (768bp) protein (256aa)
rRNA methylase, putative, group 3 {ECO:0000313|EMBL:CDM64271.1}; EC=2.1.1.185 {ECO:0000313|EMBL:CDM64271.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
RNA methyltransferase, TrmH family, group 3 (EC:2.1.1.-); K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
RNA methyltransferase
PLM4_32_coex_redo_sep16_scaffold_4122_trna_1
unknown

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6526..6597
DNA (72bp)
transferRNA Thr
PLM4_32_coex_redo_sep16_scaffold_4122_trna_2
unknown

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6680..6762
DNA (83bp)
transferRNA Tyr
PLM4_32_coex_redo_sep16_scaffold_4122_trna_3
unknown

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6804..6876
DNA (73bp)
transferRNA Gly
PLM4_32_coex_redo_sep16_scaffold_4122_trna_4
unknown

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6921..6993
DNA (73bp)
transferRNA Thr
PLM4_32_coex_redo_sep16_scaffold_4122_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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7043..8233
DNA (1191bp) protein (397aa)
tuf; elongation factor Tu (EC:3.6.5.3)
elongation factor Tu Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003655271
Elongation factor Tu {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu {ECO:0000255|HAMAP-Rule:MF_00118};; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying 12 items

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