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PLM4_32_coex_redo_sep16_scaffold_4128

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_4128_1
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..209)
DNA (207bp) protein (69aa)
RNA polymerase sigma factor Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQE7_NOCSJ
RNA polymerase sigma factor SigK
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:AIY15718.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
PLM4_32_coex_redo_sep16_scaffold_4128_2
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(265..1296)
DNA (1032bp) protein (344aa)
Tax=CG_Delta_03
PLM4_32_coex_redo_sep16_scaffold_4128_3
unknown

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1395..2738
DNA (1344bp) protein (448aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_4128_4
RHI_OD1_Uhrbacteria_60_25, Uhrbacteria, Parcubacteria, Bacteria

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2735..4225
DNA (1491bp) protein (497aa)
polynucleotide adenylyltransferase; K00974 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] bin=CNBR_ACIDO species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cca; polynucleotide adenylyltransferase/metal-dependent phosphohydrolase (EC:2.7.7.72)
Tax=RIFCSPHIGHO2_12_FULL_OD1_Uhrbacteria_60_25_curated
PLM4_32_coex_redo_sep16_scaffold_4128_5
Burkholderia sp. TJI49, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4361..5518)
DNA (1158bp) protein (386aa)
LuxR family transcriptional regulator Tax=Burkholderia sp. TJI49 RepID=F0G131_9BURK
bacterial regulatory s, luxR family protein
LuxR family transcriptional regulator {ECO:0000313|EMBL:EGD04802.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. TJI49.;"
PLM4_32_coex_redo_sep16_scaffold_4128_6
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5574..7625)
DNA (2052bp) protein (684aa)
Prolyl oligopeptidase family protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q094E1_STIAD
prolyl oligopeptidase family protein
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:EAU67088.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM4_32_coex_redo_sep16_scaffold_4128_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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7685..8224
DNA (540bp) protein (180aa)
isocitrate dehydrogenase, NAD-dependent, mitochondrial type (EC:1.1.1.41)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI000301EBFB
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying 7 items

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