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PLM4_32_coex_redo_sep16_scaffold_4311

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_4311_1
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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comp(3..668)
DNA (666bp) protein (222aa)
Peptidase S8 family protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0HZY1_CALAS
peptidase S8 family protein
Peptidase S8 family protein {ECO:0000313|EMBL:BAL98568.1}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
PLM4_32_coex_redo_sep16_scaffold_4311_2
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(679..1662)
DNA (984bp) protein (328aa)
Co/Zn/Cd efflux system component Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A7D3_DEIPD
Co/Zn/Cd efflux system protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_32_coex_redo_sep16_scaffold_4311_3
unknown

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1682..1993
DNA (312bp) protein (104aa)
hypothetical protein Tax=Dyella ginsengisoli RepID=UPI00034DEFF5
PLM4_32_coex_redo_sep16_scaffold_4311_4
Thermobaculum terrenum, Thermobaculum, Bacteria

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comp(1990..2793)
DNA (804bp) protein (268aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
Fumarate hydratase class II Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEI7_THET1
fumarate lyase
PLM4_32_coex_redo_sep16_scaffold_4311_5
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2901..3272
DNA (372bp) protein (124aa)
Binding-protein-dependent transport systems inner membrane component Tax=Cronobacter sakazakii 701 RepID=K8CPH0_CROSK
Uncharacterized protein {ECO:0000313|EMBL:KIF05522.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
PLM4_32_coex_redo_sep16_scaffold_4311_6
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

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3368..4741
DNA (1374bp) protein (458aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22 5.4.2.8)
Mannose-1-phosphate guanylyltransferase (GDP), Phosphomannomutase {ECO:0000313|EMBL:ACA59376.1}; EC=2.7.7.22 {ECO:0000313|EMBL:ACA59376.1};; EC=5.4.2.8 {ECO:0000313|EMBL:ACA59376.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Desulforudis audaxviator (strain MP104C).;"
Mannose-1-phosphate guanylyltransferase (GDP), Phosphomannomutase Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I307_DESAP
PLM4_32_coex_redo_sep16_scaffold_4311_7
unknown

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comp(4738..5082)
DNA (345bp) protein (115aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0003035303
PLM4_32_coex_redo_sep16_scaffold_4311_8
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5196..5456
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LGM6_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY12772.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM4_32_coex_redo_sep16_scaffold_4311_trna_1
unknown

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comp(5479..5550)
DNA (72bp)
transferRNA Glu
PLM4_32_coex_redo_sep16_scaffold_4311_9
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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5611..7722
DNA (2112bp) protein (704aa)
nitrogen specific signal transduction histidine kinase NtrB (EC:2.7.13.3)
Signal transduction histidine kinase, nitrogen specific, NtrB Tax=Roseiflexus sp. (strain RS-1) RepID=A5UXN7_ROSS1
Tax=RBG_16_Zixibacteria_43_9_curated
PLM4_32_coex_redo_sep16_scaffold_4311_10
CG_Arma_01, Armatimonadetes, Bacteria

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7751..8473
DNA (723bp) protein (241aa)
Integral membrane protein-like Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9AWH4_HERA2
hypothetical protein
Tax=CG_Arma_01
PLM4_32_coex_redo_sep16_scaffold_4311_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8479..8793)
DNA (315bp) protein (105aa)
Protein translocase subunit secA Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CQ47_STEMA
histone H1
Protein translocase subunit secA {ECO:0000313|EMBL:CCP12882.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
PLM4_32_coex_redo_sep16_scaffold_4311_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(8818..9834)
DNA (1017bp) protein (339aa)
Putative L-threonine dehydrogenase bin=GWA2_Methylomirabilis_73_35 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative L-threonine dehydrogenase
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_coex_redo_sep16_scaffold_4311_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(9861..10865)
DNA (1005bp) protein (335aa)
Alcohol dehydrogenase GroES domain protein bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
zinc-binding alcohol dehydrogenase protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 14 items

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