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PLM4_32_coex_redo_sep16_scaffold_1309

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_1309_1
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2..601
DNA (600bp) protein (200aa)
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase bin=GWC2_Deltaproteobacteria_66_88 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
Tax=GWA2_Deltaproteobacteria_65_63_curated
PLM4_32_coex_redo_sep16_scaffold_1309_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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619..1596
DNA (978bp) protein (326aa)
arabinose-5-phosphate isomerase (EC:5.3.1.13)
Arabinose 5-phosphate isomerase Tax=uncultured gamma proteobacterium RepID=H5SBI9_9GAMM
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_32_coex_redo_sep16_scaffold_1309_3
CSP1_5_NC10, NC10, Bacteria

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1607..2149
DNA (543bp) protein (181aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45); K03270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] bin=bin3_NC10 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC:3.1.3.45)
Tax=CSP1_5_NC10
PLM4_32_coex_redo_sep16_scaffold_1309_4
unknown

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2153..2590
DNA (438bp) protein (146aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_1309_5

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comp(2587..5073)
DNA (2487bp) protein (829aa)
Putative uncharacterized protein Tax=uncultured bacterium 293 RepID=E3T607_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADC35751.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 293.;"
Zn finger domain-containing DnaJ-class molecular chaperone
PLM4_32_coex_redo_sep16_scaffold_1309_6
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(5194..5364)
DNA (171bp) protein (57aa)
UPF0434 protein Deval_0601 Tax=Desulfovibrio vulgaris RepID=E3IR30_DESVR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM4_32_coex_redo_sep16_scaffold_1309_7
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5391..6509
DNA (1119bp) protein (373aa)
Glycosyl transferase family 9 Tax=Holophaga foetida DSM 6591 RepID=H1P0Q3_9BACT
lipopolysaccharide heptosyltransferase I
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM4_32_coex_redo_sep16_scaffold_1309_8
R_NC10_66_22, NC10, Bacteria

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comp(6489..6809)
DNA (321bp) protein (107aa)
hypothetical protein bin=bin3_NC10 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_32_coex_redo_sep16_scaffold_1309_9
Candidatus Accumulibacter sp. BA-94, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6806..7516)
DNA (711bp) protein (237aa)
lipopolysaccharide kinase
3-deoxy-D-manno-octulosonic-acid kinase {ECO:0000313|EMBL:EXI87230.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-94.;"
PLM4_32_coex_redo_sep16_scaffold_1309_10
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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comp(7513..8256)
DNA (744bp) protein (248aa)
Sec-independent protein translocase protein TatC Tax=Koribacter versatilis (strain Ellin345) RepID=TATC_KORVE
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
Sec-independent protein translocase TatC
PLM4_32_coex_redo_sep16_scaffold_1309_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(8231..8542)
DNA (312bp) protein (104aa)
putative twin-arginine translocation protein TatA2; K03116 sec-independent protein translocase protein TatA bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
tatA; twin arginine translocase protein A
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_32_coex_redo_sep16_scaffold_1309_12
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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8709..10358
DNA (1650bp) protein (550aa)
Carboxyl-terminal protease Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IN73_KORVE
carboxyl-terminal protease
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM4_32_coex_redo_sep16_scaffold_1309_13
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(10360..11031)
DNA (672bp) protein (224aa)
Uncharacterized protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LRR6_HALO1
Uncharacterized protein {ECO:0000313|EMBL:KHE93842.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_1309_14
Prevotella sp. oral taxon 473, Alloprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11028..12824)
DNA (1797bp) protein (599aa)
Putative ATP-dependent Clp protease ATP-binding subunit ClpC Tax=Prevotella sp. oral taxon 473 str. F0040 RepID=L1MC86_9BACT
Putative ATP-dependent Clp protease ATP-binding subunit ClpC {ECO:0000313|EMBL:EKX88655.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Alloprevotella.;" source="Prevotella sp. oral taxon 473 str. F0040.;"
ATP-dependent chaperone ClpB
PLM4_32_coex_redo_sep16_scaffold_1309_15
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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13138..13425
DNA (288bp) protein (96aa)
10 kDa chaperonin bin=GWC2_Methylomirabilis_70_24 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Co-chaperonin GroES (HSP10)
Tax=CG_Desulfob_01
PLM4_32_coex_redo_sep16_scaffold_1309_16
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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13464..14093
DNA (630bp) protein (210aa)
molecular chaperone GroEL Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036EC3A4
groEL; molecular chaperone GroEL
Tax=RBG_16_Acidobacteria_70_10_curated
Displaying 16 items

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