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PLM4_32_coex_redo_sep16_scaffold_1451

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_1451_1
unknown

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3..137
DNA (135bp) protein (45aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_1451_2
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

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comp(134..1594)
DNA (1461bp) protein (487aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y669_SORCE
hypothetical protein
Tax=RBG_16_Zixibacteria_40_9_curated
PLM4_32_coex_redo_sep16_scaffold_1451_3
Coraliomargarita akajimensis, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

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comp(1705..2517)
DNA (813bp) protein (271aa)
Putative uncharacterized protein Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EM39_CORAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE55199.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita.;" source="Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193; / KCTC 12865).;"
PLM4_32_coex_redo_sep16_scaffold_1451_4
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2534..3229
DNA (696bp) protein (232aa)
carbonic anhydrase (EC:4.2.1.1)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI00035D1994
PLM4_32_coex_redo_sep16_scaffold_1451_5

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comp(3186..4418)
DNA (1233bp) protein (411aa)
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium HF0770_27F21.;"
tyrosine--tRNA ligase (EC:6.1.1.1)
PLM4_32_coex_redo_sep16_scaffold_1451_6
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4415..6748)
DNA (2334bp) protein (778aa)
hypothetical protein Tax=Methylobacter marinus RepID=UPI0003676FEE
Sulfatase {ECO:0000313|EMBL:EFI51621.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
arylsulfatase
PLM4_32_coex_redo_sep16_scaffold_1451_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6760..8037)
DNA (1278bp) protein (426aa)
hypothetical protein Tax=Streptomyces sp. CNS335 RepID=UPI000365A1FC
Predicted aminopeptidase {ECO:0000313|EMBL:CDM65947.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M28
PLM4_32_coex_redo_sep16_scaffold_1451_8
BJP_08E140C01_Elusimicrobia_64_11, Elusimicrobia lineage IV, Elusimicrobia, Bacteria

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comp(8065..8730)
DNA (666bp) protein (222aa)
Uncharacterized protein bin=GWC2_OP3-like_45_7 species=Bacillus coagulans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
radC; DNA repair protein RadC
Tax=BJP_08E140C01_Elusimicrobia_64_11
PLM4_32_coex_redo_sep16_scaffold_1451_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(8738..9319)
DNA (582bp) protein (194aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGL8_CHLTF
PLM4_32_coex_redo_sep16_scaffold_1451_10
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(9312..10358)
DNA (1047bp) protein (349aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase Tax=uncultured Acidobacteria bacterium RepID=Q7X378_9BACT
PLM4_32_coex_redo_sep16_scaffold_1451_11
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10431..11816)
DNA (1386bp) protein (462aa)
amidophosphoribosyltransferase; K00764 amidophosphoribosyltransferase [EC:2.4.2.14] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
amidophosphoribosyltransferase
PLM4_32_coex_redo_sep16_scaffold_1451_12
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11840..13147)
DNA (1308bp) protein (436aa)
adenylosuccinate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
adenylosuccinate lyase (EC:4.3.2.2)
Tax=CG_Syntroph_02
PLM4_32_coex_redo_sep16_scaffold_1451_13
RLO_Entotheonella_69_37, Entotheonella, Bacteria

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comp(13144..13428)
DNA (285bp) protein (95aa)
Metal-dependent hydrolase, beta-lactamase superfamily I Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4BZT2_DESTA
metal-dependent hydrolase, beta-lactamase superfamily I
Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
Displaying 13 items

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