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PLM4_32_coex_redo_sep16_scaffold_1929

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_1929_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(3..959)
DNA (957bp) protein (319aa)
Cell division protein FtsW {ECO:0000313|EMBL:CDM67082.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
stage V sporulation protein E; K03588 cell division protein FtsW bin=bin7_NC10_sister species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
cell division protein FtsW
PLM4_32_coex_redo_sep16_scaffold_1929_2
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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comp(967..2052)
DNA (1086bp) protein (362aa)
phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase bin=GWC2_Nitrospirae_57_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM4_32_coex_redo_sep16_scaffold_1929_3
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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comp(2052..3443)
DNA (1392bp) protein (464aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10) bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
PLM4_32_coex_redo_sep16_scaffold_1929_4
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3430..4929)
DNA (1500bp) protein (500aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3N8_9FIRM
PLM4_32_coex_redo_sep16_scaffold_1929_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(4926..7058)
DNA (2133bp) protein (711aa)
Peptidoglycan synthetase FtsI bin=GWF2_Methylomirabilis_70_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
penicillin-binding protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM4_32_coex_redo_sep16_scaffold_1929_6
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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comp(7081..7476)
DNA (396bp) protein (132aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_32_coex_redo_sep16_scaffold_1929_7
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(7476..8450)
DNA (975bp) protein (325aa)
Ribosomal RNA small subunit methyltransferase H Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WQF6_KYRT2
S-adenosyl-methyltransferase MraW
Tax=RBG_16_Nitrospirae_64_22_curated
PLM4_32_coex_redo_sep16_scaffold_1929_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(8462..8902)
DNA (441bp) protein (147aa)
MraZ family transcriptional regulator Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B36E7F
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_coex_redo_sep16_scaffold_1929_9
unknown

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comp(9163..9813)
DNA (651bp) protein (217aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_1929_10
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(9806..10993)
DNA (1188bp) protein (396aa)
Filamentous hemagglutinin family outer membrane protein Tax=Microcoleus vaginatus FGP-2 RepID=F5UDS5_9CYAN
Filamentous hemagglutinin family outer membrane protein {ECO:0000313|EMBL:EGK89263.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
diguanylate cyclase
PLM4_32_coex_redo_sep16_scaffold_1929_11
unknown

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11260..11745
DNA (486bp) protein (162aa)

This feature has no annotations

Displaying 11 items

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