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PLM4_32_coex_redo_sep16_scaffold_1938

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_1938_1
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2..2950
DNA (2949bp) protein (983aa)
Putative RND efflux system, multidrug resistance protein Tax=Candidatus Nitrospira defluvii RepID=D8PIU1_9BACT
putative RND efflux system, multidrug resistance protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM4_32_coex_redo_sep16_scaffold_1938_2
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2953..4341
DNA (1389bp) protein (463aa)
RND efflux system, outer membrane lipoprotein, NodT family Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LI94_SYNFM
RND efflux system outer membrane lipoprotein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM4_32_coex_redo_sep16_scaffold_1938_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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4331..6466
DNA (2136bp) protein (712aa)
Fis family transcriptional regulator bin=CNBR_ACIDO species=Brevibacillus borstelensis genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM4_32_coex_redo_sep16_scaffold_1938_4
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6463..8067)
DNA (1605bp) protein (535aa)
Type I phosphodiesterase/nucleotide pyrophosphatase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LQ60_HALO1
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ACY17097.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM4_32_coex_redo_sep16_scaffold_1938_5
unknown

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comp(8040..8324)
DNA (285bp) protein (95aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_1938_6
R_Acidobacteria_60_20, Acidobacteria, Bacteria

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8466..9311
DNA (846bp) protein (282aa)
Serine phosphatase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITF7_KORVE
serine phosphatase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM4_32_coex_redo_sep16_scaffold_1938_7

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comp(9414..10571)
DNA (1158bp) protein (386aa)
Transposase Tax=sediment metagenome RepID=D9PLF3_9ZZZZ
Transposase {ECO:0000313|EMBL:EFK95612.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
PLM4_32_coex_redo_sep16_scaffold_1938_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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10726..11718
DNA (993bp) protein (331aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YB1_SOLUE
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABJ85354.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying 8 items

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