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PLM4_32_coex_redo_sep16_scaffold_1958

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_1958_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..598
DNA (597bp) protein (199aa)
TGF-beta receptor type I/II extracellular region Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WRI5_9GAMM
TGF-beta receptor type I/II extracellular region {ECO:0000313|EMBL:EIM02077.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
amino acid/peptide transporter (peptide:H symporter)
PLM4_32_coex_redo_sep16_scaffold_1958_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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658..1167
DNA (510bp) protein (170aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM4_32_coex_redo_sep16_scaffold_1958_3
unknown

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1164..2789
DNA (1626bp) protein (542aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_1958_4
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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comp(2869..4740)
DNA (1872bp) protein (624aa)
hypothetical protein bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin1_lowGC organism_group=Unknown_CP
peptidase M11 gametolysin
Tax=CSP1_2_Dadabacteria
PLM4_32_coex_redo_sep16_scaffold_1958_5
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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4899..5735
DNA (837bp) protein (279aa)
Putative salt-induced outer membrane protein-like protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
membrane protein
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
PLM4_32_coex_redo_sep16_scaffold_1958_6
unknown

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comp(5786..7333)
DNA (1548bp) protein (516aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_1958_7
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7333..8589)
DNA (1257bp) protein (419aa)
hypothetical protein Tax=Nocardia sp. BMG111209 RepID=UPI0003788A90
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB24071.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
PLM4_32_coex_redo_sep16_scaffold_1958_8
unknown

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comp(8607..9032)
DNA (426bp) protein (142aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_1958_9
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9061..10320)
DNA (1260bp) protein (420aa)
Uncharacterized protein Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HDQ2_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EOD58536.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_1958_10
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(10313..11662)
DNA (1350bp) protein (450aa)
Uncharacterized protein Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1H4G1_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EOD58535.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
hypothetical protein
Displaying 10 items

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