ggKbase home page

PLM4_32_coex_redo_sep16_scaffold_291_2

Organism: PLM4_32_coex_sep16_Acidobacteria_70_8

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 6 / 38
Location: comp(727..2277)

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA similarity UNIREF
DB: UNIREF100
  • Identity: 31.3
  • Coverage: 246.0
  • Bit_score: 109
  • Evalue 7.70e-21
hypothetical Protein similarity KEGG
DB: KEGG
  • Identity: 22.9
  • Coverage: 515.0
  • Bit_score: 96
  • Evalue 1.90e-17
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 29.3
  • Coverage: 475.0
  • Bit_score: 164
  • Evalue 2.20e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 1551
ATGCGCTACCTTCGCCTCATCGTGCCGCTCGCGCTCGCCGCCGCCCTCCCGGCCCAGGCGAACTGGGTCGCCTCCGGCCAGCTCGTCTACGAGCACCGGGAGTGGGACCAGCTCGGGTTCACCGGGGACATCACCATCAAGCCCGTGCGCTTCGCCGACGTCCAGGTCATCGACCCGACCAAGTCCCCGAACAAGCAGCACCTGGCCTGGGGGAAGACCGACGCCAACGGCAACTTCAGCGTCAACGTCGTGGACTCGACGACGCGCAGCAAGGTGCGCGTGCGCATCCTCTCGCAGTCCGTCCAGACGCCCGACCTGTTCGTCAAGGTCACGACCCACAGCGGATCGATCTACGCGGCGAACTCGAGTGACTACAACAACCACGGCCCCAACACGAACGTCAACTGGGGGACGATGACCACCGTTGCGTTCGGGGGGGCCGAGGTGTGCAACATCTTCGACCTCGCCGTCTACGGCGCCGACCACATCAAGAGCCTCACCGGGTCGCGCCCCAACTCTTCGAAGCTGGTCACGTTCAAGTACGCCCTCAATGGCGGGGTGACGGTGTCCACGACCTCGGGGAACTCGGTCACGCTCCGCGACACCGCGGGGTTCGACGACACCGTGATCCTTCACGAGTGGTCCCACTACGTCATGAACAACTATTCGAAGTCCTCGAACCCGGGCGGGACGCATTTCCTGTCCGACTGCAACGAGGACCCGCGGCTCGCGTTCGACGAAGCGCGCGCGTCGTTCTTCGGTTGCAGCGTGCGGCGGGCCAACGGCTGGCCGAACGCGAACACGTACGTGAGGACGAGCGGCGCTCCCGGCGTCGGGGGTGCGCTGAACACCTACAACCTGGAGACCGAGGAGCAGTACGCCTGTCTCGGGGACACGAGCGAGGTCTCGAACTCGCGCGCGATGTGGGACATCGCTGACTCGGCGTCGACGAACGACGCGACGCCGGGCGTCGAGGACACCCCGCCGGACGCGCTCGCCCTCCCCGACCTCGAGGCGTGGCAGGTCTTCGCCGGCCCGATCAAGCTCGTCACCAACGTCACCGGCGAGAGCTTCTGGAACGGCTGGTTCGATCCCACGATCGCCAACGGCAACTTTGCGGCGATGAAGGACGTCTGGAACGCCTTCACGATCGAGTTCTGGCACGACGCGGCGGAGCCGAACAACACGACGGCGACCGCGACGGCCCTCGCCCCGAACGGCGCGAACCTCCACCTGACTTACTTCTACGACGGCAACGGGGACAACAAGGGGGAGGTCGACACCGATCTCTTCGTCTTCACCGCGTCGGCGGGCCAGCCGTTCGTCGTCGAGACGCTCAACCTGCTCTCGGCCAACGACACGAACCTCGAGATCCTCGCGTCGAACGGGAGCACGGTCCTGGCGTCGAACAACGACCGGGCGGCGGGGGACAAGTCGTCGCGCATCGCGTGGACGGCGTCCTCGGCGGGGACGTACTACGTGAGGTCGAAGCGGGCCAGCGGCGGGTACACGATCCACGGGTCGTACGACCTACGGTTCACGAGCCCCTAG
PROTEIN sequence
Length: 517
MRYLRLIVPLALAAALPAQANWVASGQLVYEHREWDQLGFTGDITIKPVRFADVQVIDPTKSPNKQHLAWGKTDANGNFSVNVVDSTTRSKVRVRILSQSVQTPDLFVKVTTHSGSIYAANSSDYNNHGPNTNVNWGTMTTVAFGGAEVCNIFDLAVYGADHIKSLTGSRPNSSKLVTFKYALNGGVTVSTTSGNSVTLRDTAGFDDTVILHEWSHYVMNNYSKSSNPGGTHFLSDCNEDPRLAFDEARASFFGCSVRRANGWPNANTYVRTSGAPGVGGALNTYNLETEEQYACLGDTSEVSNSRAMWDIADSASTNDATPGVEDTPPDALALPDLEAWQVFAGPIKLVTNVTGESFWNGWFDPTIANGNFAAMKDVWNAFTIEFWHDAAEPNNTTATATALAPNGANLHLTYFYDGNGDNKGEVDTDLFVFTASAGQPFVVETLNLLSANDTNLEILASNGSTVLASNNDRAAGDKSSRIAWTASSAGTYYVRSKRASGGYTIHGSYDLRFTSP*