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PLM4_32_coex_redo_sep16_scaffold_291

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_291_1
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..740
DNA (738bp) protein (246aa)
GntR family transcriptional regulator Tax=Burkholderia bryophila RepID=UPI00035E17A6
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDT07470.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
bacterial regulatory s, gntR family protein
PLM4_32_coex_redo_sep16_scaffold_291_2
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

Not on your lists

comp(727..2277)
DNA (1551bp) protein (517aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical Protein
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PLM4_32_coex_redo_sep16_scaffold_291_3
unknown

Not on your lists

comp(2277..2789)
DNA (513bp) protein (171aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_291_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(2846..4774)
DNA (1929bp) protein (643aa)
ABC transporter related bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Eggerthella taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM4_32_coex_redo_sep16_scaffold_291_5
unknown

Not on your lists

4802..5836
DNA (1035bp) protein (345aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_291_6
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5885..7012
DNA (1128bp) protein (376aa)
Uncharacterized protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXA7_HALO1
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM4_32_coex_redo_sep16_scaffold_291_7
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

7095..8516
DNA (1422bp) protein (474aa)
Conserved repeat domain protein Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FKG8_DESAA
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM4_32_coex_redo_sep16_scaffold_291_8
CG_Proteo_01, Proteobacteria, Bacteria

Not on your lists

8548..9045
DNA (498bp) protein (166aa)
hypothetical protein Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI00024837D7
hypothetical protein
Tax=CG_Proteo_01
PLM4_32_coex_redo_sep16_scaffold_291_9
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9068..9994
DNA (927bp) protein (309aa)
Conserved repeat domain protein Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FKG8_DESAA
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:ACL01783.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
PLM4_32_coex_redo_sep16_scaffold_291_10
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10090..14880
DNA (4791bp) protein (1597aa)
Conserved repeat protein Tax=Polaromonas sp. CF318 RepID=J2LDZ4_9BURK
Conserved repeat protein {ECO:0000313|EMBL:EJL90410.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
PLM4_32_coex_redo_sep16_scaffold_291_11
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(14976..16154)
DNA (1179bp) protein (393aa)
hypothetical protein Tax=Duganella zoogloeoides RepID=UPI0003706780
diguanylate cyclase/phosphodiesterase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM4_32_coex_redo_sep16_scaffold_291_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

16249..18270
DNA (2022bp) protein (674aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036538B0
carbon starvation protein CstA
Carbon starvation protein CstA {ECO:0000313|EMBL:AHG91475.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM4_32_coex_redo_sep16_scaffold_291_13
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

18295..19488
DNA (1194bp) protein (398aa)
Xaa-Pro aminopeptidase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANV1_IGNAJ
Xaa-Pro aminopeptidase
Tax=BJP_IG2102_Ignavibacteriales_35_8
PLM4_32_coex_redo_sep16_scaffold_291_14
unknown

Not on your lists

19473..20483
DNA (1011bp) protein (337aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_291_15
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20495..21187)
DNA (693bp) protein (231aa)
Thiamine diphosphokinase Tax=Eubacterium sp. CAG:180 RepID=R5MX14_9FIRM
Thiamine diphosphokinase {ECO:0000313|EMBL:CCY89891.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
thiamine pyrophosphokinase
PLM4_32_coex_redo_sep16_scaffold_291_16
R_Omnitrophica_44_11, Omnitrophica, Bacteria

Not on your lists

comp(21227..21430)
DNA (204bp) protein (68aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) bin=GWC2_NOV_55_46 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_NOV_55_46 organism_group=Proteobacteria
cold shock protein
Tax=RIFCSPLOWO2_02_FULL_Omnitrophica_44_11_curated
PLM4_32_coex_redo_sep16_scaffold_291_17
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(21641..24103)
DNA (2463bp) protein (821aa)
ATP-dependent proteinase. Serine peptidase. MEROPS family S16 (EC:3.4.21.53) bin=bin7_NC10_sister species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=bin7_NC10_sister organism_group=NC10
lon; ATP-dependent protease La (EC:3.4.21.53)
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM4_32_coex_redo_sep16_scaffold_291_18
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24189..24545)
DNA (357bp) protein (119aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI000382185B
Heat shock protein {ECO:0000313|EMBL:KHE92609.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
Heat shock protein Hsp20
PLM4_32_coex_redo_sep16_scaffold_291_19
Anaerolinea thermophila, Anaerolinea, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(24631..26214)
DNA (1584bp) protein (528aa)
Elongation factor G Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N3M1_ANATU
fusA; elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; species="Bacteria; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Anaerolinea.;" source="Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 /; UNI-1).;"
Displaying 19 items

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