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This organism can only be binned in the context of its binning project SCN18_30_10_14_R2_B. Please contact the project owner (rohansach@berkeley.edu) to become a member and gain access.

PLM4_32_coex_redo_sep16_scaffold_389_12

Organism: PLM4_32_coex_sep16_Acidobacteria_70_8

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 6 / 38
Location: comp(13341..13982)

Top 3 Functional Annotations

Value Algorithm Source
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18) similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 208.0
  • Bit_score: 239
  • Evalue 7.50e-61
Endonuclease III bin=GWC2_Deltaproteobacteria_56_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 60.8
  • Coverage: 189.0
  • Bit_score: 241
  • Evalue 5.30e-61
Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 191.0
  • Bit_score: 243
  • Evalue 2.60e-61

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Taxonomy

RHI_Planctomycetes_52_36 → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 642
GTGAAGGCGCCCGGGTACGGACGCGTCCTGGGGCGGCTGGCGGCGCTCTACGACATCGACCGCTTCCGGCGTGCGAACGGGGAGTCCCCTTTCCGGATACTCGTCGGCTGCGTCATTTCGCTCCGAACGAAGGACGAGGTGACCTACCCGGCGACCGGCCGGTTGTTCGCCCTCGCCCGGGATCCGGCGGGCATGGGGCGCCTCTCCGAGGCCACGATCGCGAAGGCGATCTACCCGGCCGGGTTCTATCGCACGAAGGCTCGACAGATCCGCGCGCTGTCGAGGATCCTCGTCGATCGGTACGACGGGCGCGTCCCCGCCACGATCGAAGAGCTGGTCGAGCTCCCGGGGGTCGGAAGGAAGACCGCGAACCTCACCGTGACGCTCGGTTTCGGGCGGCCGGGGATCTGCGTGGACACGCACGTGCACCGGATCGCCGGCCGCCTCGGGTGGGCGGCGACGCGATCCCCCGACGAGACCGAGCGAGCCCTCCGCGCGTCACTCCCCCGGCGCTGGTGGATTCCGATCAACGAGACCCTTGTGCGTCACGGTCAGGCCGTCTGCCATCCGGTGTCGCCGCGCTGCTCCGTCTGCGCCGTTGCCCGCGTCTGCCCCCAGGTAGGCGTGGTGAGGAGCAGATAA
PROTEIN sequence
Length: 214
VKAPGYGRVLGRLAALYDIDRFRRANGESPFRILVGCVISLRTKDEVTYPATGRLFALARDPAGMGRLSEATIAKAIYPAGFYRTKARQIRALSRILVDRYDGRVPATIEELVELPGVGRKTANLTVTLGFGRPGICVDTHVHRIAGRLGWAATRSPDETERALRASLPRRWWIPINETLVRHGQAVCHPVSPRCSVCAVARVCPQVGVVRSR*