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PLM4_32_coex_redo_sep16_scaffold_2186_1

Organism: PLM4_32_coex_sep16_Acidobacteria_70_8

near complete RP 48 / 55 MC: 1 BSCG 44 / 51 ASCG 6 / 38
Location: comp(86..445)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WIU6_9SPIO similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 104.0
  • Bit_score: 81
  • Evalue 3.90e-13
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 42.3
  • Coverage: 104.0
  • Bit_score: 81
  • Evalue 1.10e-13
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Salinispira.;" source="Salinispira pacifica.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.3
  • Coverage: 104.0
  • Bit_score: 81
  • Evalue 5.50e-13

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Taxonomy

Salinispira pacifica → Salinispira → Spirochaetales → Spirochaetia → Spirochaetes → Bacteria

Sequences

DNA sequence
Length: 360
ATGATTCTGCCGCTGTTGCAACGCGAACTCTCGATCGACGATTACGTCGATCGCGACGAGGAATGCCGCCTCGCGACCCTCCTCGCCGATGTCAAGTCCGAGAGCCAGGAGGAGAAGATCTACAACAAGGAGGTGAACTCCCTCGTCAGCCGCGCGCTGCGCCGTCTCGACGAGCGGGAGCTTCACATCATCCGGAATCGCTTCGGACTGCTGGGCGGAAAAGAACTGACGCTCGAGGAGATCGGGAAGAACCTCAACCTCTCCCGCGAGCGCGTCCGGCAGCTCGAGCGTGAGGCCAAGGACAAGCTCCGTGCTTGTCTCGGTCCTCATCGCTCGCAGCTTCGATTCTCACTCGCCTGA
PROTEIN sequence
Length: 120
MILPLLQRELSIDDYVDRDEECRLATLLADVKSESQEEKIYNKEVNSLVSRALRRLDERELHIIRNRFGLLGGKELTLEEIGKNLNLSRERVRQLEREAKDKLRACLGPHRSQLRFSLA*