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PLM4_32_coex_redo_sep16_scaffold_2186

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_32_coex_redo_sep16_scaffold_2186_1
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(86..445)
DNA (360bp) protein (120aa)
RNA polymerase sigma factor RpoD Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WIU6_9SPIO
RNA polymerase sigma factor RpoD
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Salinispira.;" source="Salinispira pacifica.;"
PLM4_32_coex_redo_sep16_scaffold_2186_2
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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695..2395
DNA (1701bp) protein (567aa)
DNA mismatch repair protein MutL Tax=uncultured candidate division OP1 bacterium RepID=H5S8Y3_9BACT
DNA mismatch repair protein MutL
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM4_32_coex_redo_sep16_scaffold_2186_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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2428..3120
DNA (693bp) protein (231aa)
Soluble lytic murein transglycosylase-like protein Tax=Thioflavicoccus mobilis 8321 RepID=L0GW29_9GAMM
lytic murein transglycosylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_coex_redo_sep16_scaffold_2186_4
unknown

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comp(3092..4231)
DNA (1140bp) protein (380aa)

This feature has no annotations

PLM4_32_coex_redo_sep16_scaffold_2186_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(4228..5565)
DNA (1338bp) protein (446aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM4_32_coex_redo_sep16_scaffold_2186_6
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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5628..7142
DNA (1515bp) protein (505aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ55_CHLTF
Zn finger domain-containing DnaJ-class molecular chaperone
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:AEP12342.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM4_32_coex_redo_sep16_scaffold_2186_7
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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7201..7704
DNA (504bp) protein (168aa)
hypothetical protein; K07040 uncharacterized protein bin=bin7_NC10_sister species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_coex_redo_sep16_scaffold_2186_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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7704..7886
DNA (183bp) protein (61aa)
50S ribosomal protein L32 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000380FA7D
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000255|HAMAP-Rule:MF_00340}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_32_coex_redo_sep16_scaffold_2186_9
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7914..8900
DNA (987bp) protein (329aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GF60_GEOUR
PLM4_32_coex_redo_sep16_scaffold_2186_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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8948..9835
DNA (888bp) protein (296aa)
Malonyl CoA-acyl carrier protein transacylase bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
ACP S-malonyltransferase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_32_coex_redo_sep16_scaffold_2186_11
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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9832..10584
DNA (753bp) protein (251aa)
3-ketoacyl-(Acyl-carrier-protein) reductase Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXI5_PUSST
3-ketoacyl-ACP reductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM4_32_coex_redo_sep16_scaffold_2186_12
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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10645..10884
DNA (240bp) protein (80aa)
acyl carrier protein Tax=Pseudoalteromonas ruthenica RepID=UPI0003455EF1
acyl carrier protein
Tax=RBG_16_Gamma2_65_34_curated
PLM4_32_coex_redo_sep16_scaffold_2186_13
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

10892..11074
DNA (183bp) protein (61aa)
3-oxoacyl-ACP synthase (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIU7_CHLTF
Displaying 13 items

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