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PLM4_5_b1_sep16_scaffold_3354

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_3354_1
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..455)
DNA (453bp) protein (151aa)
PhnB Tax=uncultured bacterium RepID=K2C9A7_9BACT
glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_3354_2
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

561..1082
DNA (522bp) protein (174aa)
hypothetical protein bin=bin3_NC10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_3354_3
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1109..1636)
DNA (528bp) protein (176aa)
PhnB Tax=uncultured bacterium RepID=K2C9A7_9BACT
phnB; PhnB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_3354_4
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1670..4582)
DNA (2913bp) protein (971aa)
ATP-dependent DNA helicase pcrA Tax=Nitrosospira sp. APG3 RepID=M5DI70_9PROT
UvrD/REP helicase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_3354_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4575..5525)
DNA (951bp) protein (317aa)
DNA helicase/exodeoxyribonuclease V, subunit B Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB42_NITMU
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_3354_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5476..7332)
DNA (1857bp) protein (619aa)
Uncharacterized protein Tax=Nitrosospira sp. APG3 RepID=M5DJW7_9PROT
DNA repair protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_3354_7
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(7358..7603)
DNA (246bp) protein (82aa)
hypothetical protein Tax=Methylophilus methylotrophus RepID=UPI000371F066
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM4_5_b1_sep16_scaffold_3354_8
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7782..8384)
DNA (603bp) protein (201aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12GV1_POLSJ
pyridoxamine 5'-phosphate oxidase-like protein
Tax=RBG_16_Gamma2_60_9_curated
PLM4_5_b1_sep16_scaffold_3354_9

Not on your lists

comp(8368..9342)
DNA (975bp) protein (325aa)
Nitrilase {ECO:0000313|EMBL:AAR97431.1}; EC=3.5.5.7 {ECO:0000313|EMBL:AAR97431.1};; species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
Nitrilase Tax=uncultured organism RepID=Q6RWL8_9ZZZZ
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
PLM4_5_b1_sep16_scaffold_3354_10
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9360..9701)
DNA (342bp) protein (114aa)
Uncharacterized protein bin=bin5_DeltaP species=Marinobacter lipolyticus genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
Tax=CSP1_8_Deltaproteobacteria
PLM4_5_b1_sep16_scaffold_3354_11
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9789..10175)
DNA (387bp) protein (129aa)
Glyoxalase/bleomycin resistance protein Tax=Comamonas testosteroni ATCC 11996 RepID=H1RST1_COMTE
glyoxalase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_3354_12
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10252..10989
DNA (738bp) protein (246aa)
Response regulator receiver protein Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VSL0_POLNA
response regulator receiver protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_3354_13
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11045..11371)
DNA (327bp) protein (109aa)
Putative uncharacterized protein Tax=uncultured bacterium CSL11 RepID=G4WVC7_9BACT
ferredoxin, 4Fe-4S
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_3354_14
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11492..11821
DNA (330bp) protein (110aa)
Thioredoxin Tax=Methylovorus RepID=C6XA21_METSD
thioredoxin
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_3354_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11965..13179
DNA (1215bp) protein (405aa)
Transcription termination factor Rho Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CQL2_SIDLE
transcription termination factor Rho
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_3354_16
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13263..13526
DNA (264bp) protein (88aa)
hypothetical protein Tax=Chitiniphilus shinanonensis RepID=UPI000364E44C
50S ribosomal protein L31
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_3354_17
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13599..15188
DNA (1590bp) protein (530aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RIM6_ACCPU
transmembrane protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_3354_18
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15185..16603
DNA (1419bp) protein (473aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase Tax=Dechloromonas aromatica (strain RCB) RepID=G6PI_DECAR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_3354_19
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16607..16813
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Herminiimonas arsenicoxydans RepID=A4G3K5_HERAR
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_3354_20
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16818..18203
DNA (1386bp) protein (462aa)
D-LACTATE DEHYDROGENASE (CYTOCHROME) OXIDOREDUCTASE PROTEIN Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R6G9_CUPTR
lactate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_3354_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18203..18697
DNA (495bp) protein (165aa)
Endoribonuclease L-PSP Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C897_SPHTD
Endoribonuclease L-PSP
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_3354_22
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18694..19239)
DNA (546bp) protein (182aa)
Oligoribonuclease Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GH74_NITSI
Oligoribonuclease
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_3354_23
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19261..19569
DNA (309bp) protein (103aa)
hypothetical protein Tax=Uliginosibacterium gangwonense RepID=UPI0003664979
CAAX prenyl protease 1, putative
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Displaying 23 items

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