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PLM4_5_b1_sep16_scaffold_44

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_44_1
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..368
DNA (366bp) protein (122aa)
Putative branched-chain amino acid transport system protein Tax=Pusillimonas sp. (strain T7-7) RepID=F4GMH5_PUSST
branched-chain amino acid transport system protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_44_2
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(381..1199)
DNA (819bp) protein (273aa)
Hypothetical conserved protein Tax=uncultured Chloroflexi bacterium RepID=H5SBH2_9CHLR bin=16ft_combo_ws3_JS1 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
ParB-like nuclease domain
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM4_5_b1_sep16_scaffold_44_3
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1235..2113)
DNA (879bp) protein (293aa)
2,3-dimethylmalate lyase (EC:4.1.3.32)
2,3-dimethylmalate lyase Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VEE9_SPHWW
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_44_4
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2110..2574)
DNA (465bp) protein (155aa)
hypothetical protein Tax=Pusillimonas noertemannii RepID=UPI00036A9497
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_44_5
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2571..3356)
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5Y1_AROAE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_44_6
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3353..4552)
DNA (1200bp) protein (400aa)
Uncharacterized protein Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5Y8_AROAE
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_44_7
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4513..5721)
DNA (1209bp) protein (403aa)
CMP-binding protein Tax=Azoarcus toluclasticus RepID=UPI00037A8E87
CoA-transferase protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_44_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5703..8075)
DNA (2373bp) protein (791aa)
Large subunit of molybdenum enzyme Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5Z4_AROAE
large subunit of molybdenum enzyme
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_44_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8072..8554)
DNA (483bp) protein (161aa)
Small Fe/S-containing subunit of molybdenum enzyme Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P5Z5_AROAE
small Fe/S-containing subunit of molybdenum enzyme
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_44_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8538..9404)
DNA (867bp) protein (289aa)
Molybdopterin dehydrogenase, FAD-binding protein Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LN4_RHOP5
molybdopterin dehydrogenase protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_44_11
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9405..11021)
DNA (1617bp) protein (539aa)
methylmalonyl-CoA mutase Tax=Azoarcus toluclasticus RepID=UPI000365E8C4
sbmA; methylmalonyl-CoA mutase subunit alpha
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM4_5_b1_sep16_scaffold_44_12
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11018..11416)
DNA (399bp) protein (133aa)
methylmalonyl-CoA mutase Tax=Azoarcus toluclasticus RepID=UPI00035C9230
SbmB; methylmalonyl-CoA mutase C-terminal domain-containing protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_44_13
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11413..12549)
DNA (1137bp) protein (379aa)
acyl-CoA dehydrogenase Tax=Azoarcus toluclasticus RepID=UPI000380CE81
acyl-CoA dehydrogenase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_44_14
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12551..14026)
DNA (1476bp) protein (492aa)
AMP-dependent synthetase and ligase Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LN1_RHOP5
AMP-dependent synthetase and ligase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_44_15
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14028..15233)
DNA (1206bp) protein (402aa)
thiolase Tax=Azoarcus toluclasticus RepID=UPI0003610292
thiolase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_44_16
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15237..15905)
DNA (669bp) protein (223aa)
Transcriptional regulator, GntR family Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07LM9_RHOP5
GntR family transcriptional regulator
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_44_17
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15983..18064
DNA (2082bp) protein (694aa)
Hydantoinase/oxoprolinase Tax=delta proteobacterium NaphS2 RepID=D8FEU6_9DELT
N-methylhydantoinase A/acetone carboxylase, beta subunit
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_44_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18061..19734
DNA (1674bp) protein (558aa)
Hydantoinase B/oxoprolinase Tax=delta proteobacterium NaphS2 RepID=D8FEU7_9DELT
N-methylhydantoinase B/acetone carboxylase, alpha subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_44_19
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19811..21175
DNA (1365bp) protein (455aa)
tryptophan synthase subunit beta Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002627B13
tryptophan synthase subunit beta
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM4_5_b1_sep16_scaffold_44_20
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21278..21505
DNA (228bp) protein (76aa)
Uncharacterized protein bin=GWC2_Syntrophus__56_31 species=unknown genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_44_21
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21535..21882)
DNA (348bp) protein (116aa)
hypothetical protein Tax=Hyphomicrobium zavarzinii RepID=UPI0003744F37
endoribonuclease L-PSP family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_44_22
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21891..22274)
DNA (384bp) protein (128aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000382DC13
DoxX family protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_44_23
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22271..23479)
DNA (1209bp) protein (403aa)
Monooxygenase FAD-binding Tax=Variovorax paradoxus (strain S110) RepID=C5CZL0_VARPS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_44_24
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23479..24444)
DNA (966bp) protein (322aa)
Candidate extracytoplasmic binding receptor Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y191_RAMTT
tctC; extracytoplasmic binding receptor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_44_25
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24455..25411)
DNA (957bp) protein (319aa)
hypothetical protein Tax=Limnohabitans sp. Rim28 RepID=UPI00036D5153
putative Bug-like extra cytoplasmic solute receptor, TTT family
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM4_5_b1_sep16_scaffold_44_26
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25432..25956)
DNA (525bp) protein (175aa)
Putative uncharacterized protein Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VIY5_CAUST
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
PLM4_5_b1_sep16_scaffold_44_27
unknown

Not on your lists

comp(25953..26363)
DNA (411bp) protein (137aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_44_28
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26420..26713)
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Cupriavidus basilensis OR16 RepID=H1SFF9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EXI87441.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-93.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_44_29
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26740..27111)
DNA (372bp) protein (124aa)
Putative uncharacterized protein Tax=Bradyrhizobium sp. WSM471 RepID=H5YJ91_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_44_30
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27118..27309)
DNA (192bp) protein (64aa)
Uncharacterized protein Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y665_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG92751.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
Displaying items 1-30 of 61 in total

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