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PLM4_5_b1_sep16_scaffold_141

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_141_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..560)
DNA (558bp) protein (186aa)
ilvC; Ketol-acid reductoisomerase (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) (EC:1.1.1.86)
Ketol-acid reductoisomerase Tax=uncultured bacterium A1Q1_fos_36 RepID=L7VY53_9BACT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_141_2
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(612..1103)
DNA (492bp) protein (164aa)
Acetolactate synthase, small subunit Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM09_AZOSU
acetolactate synthase small subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_141_3
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1103..2818)
DNA (1716bp) protein (572aa)
Acetolactate synthase large subunit Tax=Nitrosospira sp. APG3 RepID=M5DGB6_9PROT
acetolactate synthase, large subunit, biosynthetic type
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_141_4
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3031..3525
DNA (495bp) protein (165aa)
RNA polymerase sigma70 factor Tax=Pseudomonas pyrrocinia RepID=UPI0002D75FF0
RNA polymerase sigma-70 factor
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_141_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3553..3933
DNA (381bp) protein (127aa)
hypothetical protein Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000380C5F9
COG: DNA-directed RNA polymerase specialized sigma subunit
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_141_6
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3906..4361
DNA (456bp) protein (152aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RP68_ACCPU
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_141_7
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4391..4747
DNA (357bp) protein (119aa)
RDD Tax=mine drainage metagenome RepID=E6QPX8_9ZZZZ
transmembrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_141_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4744..5829)
DNA (1086bp) protein (362aa)
Putative permease Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QM15_AZOSU
putative permease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_141_9
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5826..6926)
DNA (1101bp) protein (367aa)
YjgP/YjgQ family permease Tax=Sulfuricella denitrificans skB26 RepID=S6ABF4_9PROT
putative permease
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_141_10
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6964..8469
DNA (1506bp) protein (502aa)
multifunctional aminopeptidase A Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI000382B9C4
leucyl aminopeptidase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_141_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8466..8894
DNA (429bp) protein (143aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI00036B0C38
DNA polymerase III chi subunit, HolC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_141_12
unknown

Not on your lists

8891..9199
DNA (309bp) protein (103aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_141_13
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9202..11928
DNA (2727bp) protein (909aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
valyl-tRNA synthase Tax=Herbaspirillum sp. JC206 RepID=UPI0002F9F450
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_141_14
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11925..13184
DNA (1260bp) protein (420aa)
hypothetical protein Tax=Cupriavidus sp. UYPR2.512 RepID=UPI0003620086
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ65140.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
PLM4_5_b1_sep16_scaffold_141_15
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13181..13813)
DNA (633bp) protein (211aa)
hypothetical protein Tax=Methyloversatilis universalis RepID=UPI0003809E8F
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_141_16
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13807..14229)
DNA (423bp) protein (141aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_141_17
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14345..15334
DNA (990bp) protein (330aa)
Chromate resistance exported protein Tax=Burkholderia ambifaria IOP40-10 RepID=B1F7S6_9BURK
chromate resistance exported protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_141_18
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15335..16777)
DNA (1443bp) protein (481aa)
Putative Zn-dependent protease Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKP0_AZOSU
putative Zn-dependent protease
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_141_19
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16829..17332
DNA (504bp) protein (168aa)
Cyclic pyranopterin monophosphate synthase accessory protein Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LSL8_9BURK
moaC; molybdopterin cofactor biosynthesis protein MoaC
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_141_20
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17398..18960
DNA (1563bp) protein (521aa)
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_141_21
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18960..19697
DNA (738bp) protein (246aa)
ABC transporter Tax=Ralstonia sp. PBA RepID=I9BYH3_9RALS
ABC transporter
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_141_22
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19694..20926
DNA (1233bp) protein (411aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
multidrug ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_141_23
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20923..22611
DNA (1689bp) protein (563aa)
Uncharacterized protein Tax=Herminiimonas arsenicoxydans RepID=A4G8A3_HERAR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_141_24
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22649..24235)
DNA (1587bp) protein (529aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZIU2_AZOL4
Conserved protein of unknown function; TPR domain
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_141_25
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24326..24796)
DNA (471bp) protein (157aa)
Type 4 fimbrial PilA Tax=Acidovorax sp. KKS102 RepID=K0I6U2_9BURK
type 4 fimbrial PilA
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_141_26
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24957..26600)
DNA (1644bp) protein (548aa)
phosphohydrolase with GAF sensor Tax=Methyloversatilis sp. NVD RepID=UPI00037ADE91
metal dependent phosphohydrolase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_141_27
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26623..28992)
DNA (2370bp) protein (790aa)
secretion system protein E Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI000367A6B2
phytochrome sensor protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_141_28
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29106..29873)
DNA (768bp) protein (256aa)
Beta-lactamase domain protein bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
beta-lactamase domain protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_141_29
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29883..32102)
DNA (2220bp) protein (740aa)
hypothetical protein Tax=Rhodocyclus sp. UW 659-1-F08 RepID=UPI00037C07D9
adenylate/guanylate cyclase with Chase sensor
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_141_30
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32151..33005)
DNA (855bp) protein (285aa)
signal peptide protein Tax=Methyloversatilis universalis RepID=UPI0003702ACC
FHA domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
Displaying items 1-30 of 48 in total

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