ggKbase home page

PLM4_5_b1_sep16_scaffold_455

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_455_1
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..253)
DNA (252bp) protein (84aa)
tmk; thymidylate kinase (EC:2.7.4.9)
hypothetical protein Tax=Bordetella sp. FB-8 RepID=UPI00035CA1BE
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_455_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250..1251)
DNA (1002bp) protein (334aa)
Uncharacterized protein Tax=Ralstonia solanacearum SD54 RepID=V5A633_RALSL
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_455_3
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1289..2200
DNA (912bp) protein (304aa)
Glycine cleavage T-protein (Aminomethyl transferase) Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SH38_THIDA
glycine cleavage system protein T
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_455_4
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2197..2454
DNA (258bp) protein (86aa)
hypothetical protein Tax=Methyloversatilis sp. NVD RepID=UPI000372BE1B
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_455_5
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2445..3104
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RR81_ACCPU
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_455_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3074..3496)
DNA (423bp) protein (141aa)
GCN5-related N-acetyltransferase Tax=Thauera RepID=C4K9N3_THASP
GCN5-like N-acetyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_455_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3520..5490
DNA (1971bp) protein (657aa)
Short-chain alcohol dehydrogenase family Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XL80_SYNP2
short chain dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_455_8
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5487..6446
DNA (960bp) protein (320aa)
putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase Tax=Holophaga foetida DSM 6591 RepID=H1P2U1_9BACT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_455_9
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6419..6883)
DNA (465bp) protein (155aa)
hypothetical protein Tax=Methyloversatilis sp. NVD RepID=UPI00036320FD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_455_10
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6880..7305)
DNA (426bp) protein (142aa)
Zinc-binding CMP/dCMP deaminase Tax=Thauera RepID=N6YFF7_9RHOO
zinc-binding protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_455_11
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7385..8464
DNA (1080bp) protein (360aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RLJ6_ACCPU
hypothetical protein
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_455_12
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

8694..10214
DNA (1521bp) protein (507aa)
Amidohydrolase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZJ4_RUBXD
hypothetical protein
Tax=RBG_16_Actinobacteria_67_15_curated
PLM4_5_b1_sep16_scaffold_455_13
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(10313..12028)
DNA (1716bp) protein (572aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037036D2
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM4_5_b1_sep16_scaffold_455_14
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

12218..15031
DNA (2814bp) protein (938aa)
hypothetical protein Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI000382411D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE86000.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
PLM4_5_b1_sep16_scaffold_455_15
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15107..16333
DNA (1227bp) protein (409aa)
Uncharacterized protein Tax=Streptomyces ipomoeae 91-03 RepID=L1KRL6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EKX63018.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_455_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(16368..18080)
DNA (1713bp) protein (571aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037036D2
serine/threonine protein kinase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM4_5_b1_sep16_scaffold_455_17
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18254..19225
DNA (972bp) protein (324aa)
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM4_5_b1_sep16_scaffold_455_18
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19368..19547
DNA (180bp) protein (60aa)
hypothetical protein Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00036F9157
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM4_5_b1_sep16_scaffold_455_19
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19558..21120)
DNA (1563bp) protein (521aa)
GMP synthase Tax=Uliginosibacterium gangwonense RepID=UPI000382E8A3
GMP synthase
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_455_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21128..22588)
DNA (1461bp) protein (487aa)
inosine 5''''-monophosphate dehydrogenase Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI0003660390
inosine-5'-monophosphate dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_455_21
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22672..23148
DNA (477bp) protein (159aa)
Putative uncharacterized protein bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_455_22
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23155..23421)
DNA (267bp) protein (89aa)
UPF0125 protein Tmz1t_2625 Tax=Thauera RepID=C4KA01_THASP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_455_23
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23396..23788)
DNA (393bp) protein (131aa)
Putative oligoketide cyclase/lipid transport protein Tax=Collimonas fungivorans (strain Ter331) RepID=G0AB62_COLFT
Putative oligoketide cyclase/lipid transport protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
Displaying 23 items

View Taxonomy