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PLM4_5_b1_sep16_scaffold_490

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_490_1
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..597
DNA (597bp) protein (199aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase Tax=Acidovorax radicis RepID=UPI000237869E
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:EHL23046.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
CDP-diacylglycerol--serine O-phosphatidyltransferase
PLM4_5_b1_sep16_scaffold_490_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

680..1951
DNA (1272bp) protein (424aa)
GTPase HflX Tax=Dechloromonas aromatica (strain RCB) RepID=Q47CI1_DECAR
GTP-binding protein, HSR1-related
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_490_3
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1941..2303)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Nitrosospira sp. APG3 RepID=M5DFE3_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_490_4
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2290..3138)
DNA (849bp) protein (283aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI000368E9CF
rhodanese domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_490_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3111..4220)
DNA (1110bp) protein (370aa)
Rieske (2Fe-2S) protein Tax=Methyloversatilis universalis RepID=UPI00037C44C4
Rieske (2Fe-2S) iron-sulfur domain protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_490_6
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4305..4547
DNA (243bp) protein (81aa)
Exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit Tax=Cupriavidus basilensis OR16 RepID=H1S6E7_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_490_7
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4567..5436
DNA (870bp) protein (290aa)
Farnesyl diphosphate synthase (SelFPS) Tax=Synechococcus elongatus RepID=Q9S5F0_SYNEL
polyprenyl synthetase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_490_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5439..7280
DNA (1842bp) protein (614aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase Tax=Burkholderia rhizoxinica (strain DSM 19002 / CIP 109453 / HKI 454) RepID=E5APH0_BURRH
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_490_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7306..8112
DNA (807bp) protein (269aa)
GTP cyclohydrolase (EC:3.5.4.16)
GTP cyclohydrolase Tax=Azoarcus toluclasticus RepID=UPI00036E9DEB
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_490_10
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8132..8815
DNA (684bp) protein (228aa)
Protein-L-isoaspartate O-methyltransferase Tax=Ralstonia pickettii DTP0602 RepID=U3QR18_RALPI
protein-L-isoaspartate O-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_490_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8839..9126)
DNA (288bp) protein (96aa)
hypothetical protein Tax=Thiobacillus thioparus RepID=UPI00035CFE5B
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
PLM4_5_b1_sep16_scaffold_490_12
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9327..10031
DNA (705bp) protein (235aa)
Structural protein MipA Tax=Ralstonia sp. AU12-08 RepID=S9T086_9RALS
Structural protein MipA {ECO:0000313|EMBL:KHK51966.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
PLM4_5_b1_sep16_scaffold_490_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10036..10812)
DNA (777bp) protein (259aa)
UPF0317 protein Q5W_2238 Tax=Hydrogenophaga sp. PBC RepID=I4MNQ0_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_490_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(10833..11795)
DNA (963bp) protein (321aa)
Sel1 repeat protein Tax=Neisseria sicca ATCC 29256 RepID=C6M9S1_NEISI
msfA; vHiSLR1, Sel1-like repeat protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM4_5_b1_sep16_scaffold_490_15
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11795..12406)
DNA (612bp) protein (204aa)
Putative uncharacterized protein Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SKF3_THIDA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_490_16
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12423..13133
DNA (711bp) protein (237aa)
Glutamine amidotransferase class-I Tax=Sulfuricella denitrificans skB26 RepID=S6AMG5_9PROT
glutamine amidotransferase class-I
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_490_17
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13109..14197
DNA (1089bp) protein (363aa)
Hydrogenase/urease accessory protein Tax=Bradyrhizobium sp. YR681 RepID=J2VWB4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KJB96522.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_490_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14296..15549
DNA (1254bp) protein (418aa)
Formamidase (EC:3.5.1.49)
Acetamidase/Formamidase family Tax=Synechococcus sp. PCC 7335 RepID=B4WPW3_9SYNE
Formamidase {ECO:0000313|EMBL:ETW98194.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM4_5_b1_sep16_scaffold_490_19
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15574..16137
DNA (564bp) protein (188aa)
Putative uncharacterized protein Tax=Synechococcus sp. PCC 7335 RepID=B4WPW2_9SYNE
Uncharacterized protein {ECO:0000313|EMBL:ETW98195.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM4_5_b1_sep16_scaffold_490_20
unknown

Not on your lists

16137..16856
DNA (720bp) protein (240aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_490_21
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16904..17389)
DNA (486bp) protein (162aa)
UPF0234 protein Nmul_A1044 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Y1044_NITMU
putative nucleotide-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
PLM4_5_b1_sep16_scaffold_490_22
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17397..18053)
DNA (657bp) protein (219aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_490_23
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18050..19282)
DNA (1233bp) protein (411aa)
argininosuccinate synthase Tax=Thiomonas sp. FB-6 RepID=UPI00036D4486
argininosuccinate synthase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_490_24
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19279..20205)
DNA (927bp) protein (309aa)
ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=OTC_METFK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM4_5_b1_sep16_scaffold_490_25
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20224..21429)
DNA (1206bp) protein (402aa)
argD; acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase Tax=Thauera terpenica 58Eu RepID=S9ZEU4_9RHOO
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_490_26
RBG_16_Betaproteobacteria_66_20_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21491..22852)
DNA (1362bp) protein (454aa)
arginine decarboxylase (EC:4.1.1.19)
Arginine decarboxylase Lysine decarboxylase Ornithine decarboxylase Tax=Nitrosospira sp. APG3 RepID=M5DIN1_9PROT
Tax=RBG_16_Betaproteobacteria_66_20_curated
PLM4_5_b1_sep16_scaffold_490_27
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23503..23766)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RTM9_9BURK
rpsT; 30S ribosomal protein S20
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
PLM4_5_b1_sep16_scaffold_490_28
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23805..25343
DNA (1539bp) protein (513aa)
Integral membrane protein MviN Tax=Methylovorus sp. (strain MP688) RepID=E4QJ70_METS6
mviN; integral membrane protein mvin
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM4_5_b1_sep16_scaffold_490_29
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25343..26194
DNA (852bp) protein (284aa)
Putative uncharacterized protein bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas suwonensis genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM4_5_b1_sep16_scaffold_490_30
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26187..26732)
DNA (546bp) protein (182aa)
Membrane protein Tax=Pandoraea RepID=V5UCF2_9BURK
membrane protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
Displaying items 1-30 of 32 in total

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