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PLM4_5_b1_sep16_scaffold_3301

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_3301_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..610)
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Lutibaculum baratangense AMV1 RepID=V4TI07_9RHIZ
mandelate racemase/muconate lactonizing protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_3301_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

682..1719
DNA (1038bp) protein (346aa)
Exported protein Tax=Ralstonia sp. PBA RepID=I9BVL8_9RALS
bugT3; extra-cytoplasmic solute receptor BugT
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_3301_3
unknown

Not on your lists

comp(1585..1863)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_3301_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1921..2892)
DNA (972bp) protein (324aa)
Uncharacterized protein Tax=Ralstonia sp. PBA RepID=I9W8U2_9RALS
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_3301_5
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(2900..4294)
DNA (1395bp) protein (465aa)
Uncharacterized protein Tax=Oceanicola granulosus HTCC2516 RepID=Q2CJC0_9RHOB
MmgE/PrpD family protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_5_b1_sep16_scaffold_3301_6
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(4431..4829)
DNA (399bp) protein (133aa)
Putative uncharacterized protein Tax=Ectocarpus siliculosus RepID=D7FQB5_ECTSI
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM4_5_b1_sep16_scaffold_3301_7
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4875..5858)
DNA (984bp) protein (328aa)
Uncharacterized protein bin=GWC2_Syntrophus__56_31 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=GWC2_Syntrophus_56_31_curated
PLM4_5_b1_sep16_scaffold_3301_8
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5866..6669)
DNA (804bp) protein (268aa)
hypothetical protein, partial Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003829040
HpcH/HpaI aldolase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM4_5_b1_sep16_scaffold_3301_9
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6755..7270)
DNA (516bp) protein (172aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
msrA-1; peptide methionine sulfoxide reductase MsrA 1 (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA Tax=Rhizobium etli RepID=Q2K237_RHIEC
PLM4_5_b1_sep16_scaffold_3301_10
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7510..8109)
DNA (600bp) protein (200aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
msrB; Peptide methionine sulfoxide reductase MsrB (EC:1.8.4.12)
methionine sulfoxide reductase B Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003712453
PLM4_5_b1_sep16_scaffold_3301_11
unknown

Not on your lists

comp(8096..8437)
DNA (342bp) protein (114aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_3301_12
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8558..9406)
DNA (849bp) protein (283aa)
fabG; 3-ketoacyl-(acyl-carrier-protein) reductase (EC:1.1.1.100)
hypothetical protein Tax=Marinobacterium rhizophilum RepID=UPI00036FD390
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM4_5_b1_sep16_scaffold_3301_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9523..10005
DNA (483bp) protein (161aa)
ABC transporter substrate-binding protein Tax=Cupriavidus sp. HMR-1 RepID=L2EJU6_9BURK
bug; ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying 13 items

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