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PLM4_5_b1_sep16_scaffold_12142

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_12142_1
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..183)
DNA (183bp) protein (61aa)
Penicillin-binding protein, 1A family Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CTP3_SIDLE
penicillin-binding protein, 1A family
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
PLM4_5_b1_sep16_scaffold_12142_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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432..1523
DNA (1092bp) protein (364aa)
Type IV pilus assembly protein PilM Tax=Sulfuricella denitrificans skB26 RepID=S6ABH1_9PROT
type IV pilus assembly protein PilM
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM4_5_b1_sep16_scaffold_12142_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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1520..2158
DNA (639bp) protein (213aa)
Fimbrial assembly Tax=Dechloromonas aromatica (strain RCB) RepID=Q47JL1_DECAR
fimbrial assembly
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_12142_4
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

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2155..2790
DNA (636bp) protein (212aa)
Pilus assembly protein PilO Tax=Sulfuricella denitrificans skB26 RepID=S6B8U2_9PROT
pilus assembly protein PilO
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_12142_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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2787..3311
DNA (525bp) protein (175aa)
pilus assembly protein PilP Tax=Thiobacillus thioparus RepID=UPI000365AAD1
pilus assembly protein PilP
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_12142_6
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3376..3810
DNA (435bp) protein (145aa)
Type IV pilus secretin PilQ Tax=Sulfuricella denitrificans skB26 RepID=S6APC6_9PROT
type IV pilus secretin PilQ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_12142_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3801..4307
DNA (507bp) protein (169aa)
Type IV pilus secretin PilQ bin=GWE2_Gallionellales_58_10 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
type IV pilus secretin PilQ
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_12142_8
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4313..5482
DNA (1170bp) protein (390aa)
Type IV pilus secretin PilQ Tax=Sulfuricella denitrificans skB26 RepID=S6APC6_9PROT
type IV pilus secretin PilQ
Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
PLM4_5_b1_sep16_scaffold_12142_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5513..6100
DNA (588bp) protein (196aa)
aroK; shikimate kinase (EC:2.7.1.71)
shikimate kinase Tax=Aquaspirillum serpens RepID=UPI0003B32927
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM4_5_b1_sep16_scaffold_12142_10
unknown

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6130..6240
DNA (111bp) protein (37aa)

This feature has no annotations

Displaying 10 items

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