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PLM4_5_b1_sep16_scaffold_3926

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_3926_1
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(1..438)
DNA (438bp) protein (146aa)
Putative oligopeptide ABC transporter ATP-binding protein bin=GWC2_Chloroflexi_73_18 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
oligopeptide/dipeptide ABC transporter ATPase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM4_5_b1_sep16_scaffold_3926_2
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(435..1448)
DNA (1014bp) protein (338aa)
Oligopeptide ABC transporter, ATP-binding protein Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L0D6_THERP
oligopeptide ABC transporter ATP-binding protein
Oligopeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ACM06035.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
PLM4_5_b1_sep16_scaffold_3926_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(1435..2346)
DNA (912bp) protein (304aa)
binding-protein-dependent transporters inner membrane component; K02034 peptide/nickel transport system permease protein bin=bin8_Chloro species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
diguanylate cyclase
Tax=CSP1_4_Chloroflexi
PLM4_5_b1_sep16_scaffold_3926_4
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(2346..3353)
DNA (1008bp) protein (336aa)
Binding-protein-dependent transport systems inner membrane component Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S646_GEOOG
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADB73263.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM4_5_b1_sep16_scaffold_3926_5
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3385..5061)
DNA (1677bp) protein (559aa)
Extracellular solute-binding protein family 5 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S645_GEOOG
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM11949.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
family 5 extracellular solute-binding protein
PLM4_5_b1_sep16_scaffold_3926_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5193..6188)
DNA (996bp) protein (332aa)
RNA polymerase sigma factor SigA Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CXH1_HALOH
RpoD subfamily RNA polymerase sigma-70 subunit
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3926_7
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6555..8048)
DNA (1494bp) protein (498aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I Tax=Nocardiopsis alkaliphila RepID=UPI00034B01CC
PLM4_5_b1_sep16_scaffold_3926_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8393..8926)
DNA (534bp) protein (178aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase I Tax=Streptomyces scabrisporus RepID=UPI00035C8A11
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3926_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

8973..9593
DNA (621bp) protein (207aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase Tax=Paenibacillus massiliensis RepID=UPI00037ACEFD
1-acyl-sn-glycerol-3-phosphate acyltransferase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3926_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

9590..10417
DNA (828bp) protein (276aa)
DNA polymerase I Tax=[Caldibacillus] cellulovorans RepID=Q6X9S0_9BACL
DNA polymerase I
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3926_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10414..11253
DNA (840bp) protein (280aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EMG5_9CHLR
histone deacetylase family protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3926_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11392..12036)
DNA (645bp) protein (215aa)
Transcriptional regulatory protein liaR Tax=Nitrolancetus hollandicus Lb RepID=I4EFN7_9CHLR
two component LuxR family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3926_13
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12079..13464
DNA (1386bp) protein (462aa)
hypothetical protein Tax=Ornithinimicrobium pekingense RepID=UPI0003B72E8F
two-component system histidine kinase
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3926_14
Arthrobacter sp. IHBB 11108, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13503..13868
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) RepID=B8H7X2_ARTCA
membrane protein
Membrane protein {ECO:0000313|EMBL:AJT42091.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. IHBB 11108.;"
PLM4_5_b1_sep16_scaffold_3926_15
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

13998..16520
DNA (2523bp) protein (841aa)
hypothetical protein Tax=Desulfospira joergensenii RepID=UPI0003B4222D
hypothetical protein
Tax=RBG_16_Chloroflexi_57_11_curated
PLM4_5_b1_sep16_scaffold_3926_16
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16674..18077
DNA (1404bp) protein (468aa)
cpo; phosphoesterase, PA-phosphatase-like protein (EC:1.11.1.10)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036F0A30
PA-phosphatase {ECO:0000313|EMBL:KGN33445.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
PLM4_5_b1_sep16_scaffold_3926_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

18199..20661
DNA (2463bp) protein (821aa)
Adenylate/guanylate cyclase bin=GWC2_Chloroflexi_73_18 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
LuxR family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3926_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21039..21239)
DNA (201bp) protein (67aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM4_5_b1_sep16_scaffold_3926_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(21239..21448)
DNA (210bp) protein (70aa)
LexA family transcriptional repressor (EC:3.4.21.88)
LexA repressor Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WWW9_ALIAD
Tax=RBG_16_Actinobacteria_68_12_curated
Displaying 19 items

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